PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV55274.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | MYB_related | ||||||||
Protein Properties | Length: 217aa MW: 25233.5 Da PI: 9.9146 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.5 | 3.1e-13 | 122 | 166 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + k +G g+W++I+r + ++t+ q+ s+ qky KZV55274.1 122 PWTEEEHRLFLIGLKTYGRGDWRSISRNVVVTKTPTQVASHAQKY 166 8*******************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 0.028 | 12 | 64 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 8.00E-6 | 15 | 62 | No hit | No description |
SuperFamily | SSF46689 | 2.14E-8 | 15 | 66 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50090 | 6.551 | 16 | 62 | IPR017877 | Myb-like domain |
PROSITE profile | PS51294 | 18.692 | 115 | 171 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.28E-16 | 117 | 170 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.7E-17 | 118 | 170 | IPR006447 | Myb domain, plants |
SMART | SM00717 | 1.7E-10 | 119 | 169 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.1E-10 | 119 | 165 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 4.7E-11 | 122 | 166 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 3.47E-9 | 122 | 167 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MYANFPAMAL TFPATWNRRE DKIFENCLVE IPDFVENRWH MIARRIPGKS PEDVWAHYEA 60 LLFDVRQIDT GLVQPPRYPD ETVTRSLPGD YRPQLRDPGQ IWFASGPGRN RHVEVERKKG 120 RPWTEEEHRL FLIGLKTYGR GDWRSISRNV VVTKTPTQVA SHAQKYFLRQ YSRKEKKRSS 180 IHDITTATDS LTVPAQPNLP VPDQANSQSS QFKQEAM |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV55274.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011084236.1 | 5e-78 | transcription factor SRM1-like | ||||
TrEMBL | A0A2Z7D6M1 | 1e-161 | A0A2Z7D6M1_9LAMI; Transcription factor DIVARICATA | ||||
STRING | Migut.F01593.1.p | 1e-72 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4547 | 22 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 4e-57 | MYB family protein |