PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV54504.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 223aa    MW: 25626 Da    PI: 4.5675
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV54504.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.34.9e-12124167654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  KZV54504.1 124 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 167
                 589*********************66......****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.453118167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.63E-16121181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-9124167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-12124173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-15125179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.42E-5125171No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MEYSSEMCLM EELLLVKDME YYNYPNDVED FDSLDTFLAT NKNNIISSSI NAHCSFEDYF  60
PIDTLQTFNY DEQQYSNIYL NNSTTGGLLD GFQRPSVVAD EPLPVSNESK NETKKVNGQP  120
SKNLMAERRR RKRLNDRLSM LRSVVPKISK MDRTSILGDT IDYMKELREK INNLQEEMEI  180
EGGGVMRVFK DANKPKEILA PKSEVLVIGG NKYDGFGSQW LII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126133ERRRRKRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV54504.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074290.19e-36transcription factor bHLH93
TrEMBLA0A2Z7D4C81e-163A0A2Z7D4C8_9LAMI; Uncharacterized protein
STRINGXP_010254652.14e-33(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7892497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-27beta HLH protein 93