PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV54376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 292aa MW: 32307.8 Da PI: 4.0487 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.6 | 4.2e-20 | 31 | 80 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdps r r +lg+++taeeAa +++a+ kl+g KZV54376.1 31 KFRGVRQRP-WGKWAAEIRDPS----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 80 89*******.**********84....34*************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 3.2E-30 | 30 | 88 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 7.20E-34 | 31 | 87 | No hit | No description |
Pfam | PF00847 | 4.0E-13 | 31 | 80 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.3E-39 | 31 | 94 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.933 | 31 | 88 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.89E-22 | 31 | 89 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 2.8E-10 | 32 | 43 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.8E-10 | 54 | 70 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence Send to blast |
MRRNAEILQA KPKPMKVKEA PPPVDSTGVR KFRGVRQRPW GKWAAEIRDP SRRVRLWLGT 60 YDTAEEAAMV YDNAAIKLRG PDALTNFSTP TVTEISPETN VMSLSGYDSV DESHNLTSPT 120 SVLRFRSSHS SEDGEPTRSG LVQCSDQEVD PDGSAEGEGS LIKSVDAPNE PVPEIGSCNG 180 PVVEVDEYEG ETNMVPDYSS DLWPMDIPFL DDFFNFQPQD HKLFDNEQVL AGGFPGSMLF 240 DDIPALDTSL QDAEFRGFKE CQEFSPLQVD DFLQDMSDEF ASVDALMAIS IA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 8e-21 | 30 | 87 | 1 | 59 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV54376.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011084481.1 | 1e-106 | ethylene-responsive transcription factor CRF4-like | ||||
TrEMBL | A0A2Z7DAV4 | 0.0 | A0A2Z7DAV4_9LAMI; Uncharacterized protein | ||||
STRING | Migut.F00247.1.p | 1e-92 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA494 | 23 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 8e-43 | cytokinin response factor 4 |