PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV54376.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 292aa    MW: 32307.8 Da    PI: 4.0487
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV54376.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.2e-203180255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +++GVr+++ +g+W+AeIrdps    r  r +lg+++taeeAa  +++a+ kl+g
  KZV54376.1 31 KFRGVRQRP-WGKWAAEIRDPS----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 80
                89*******.**********84....34*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.2E-303088IPR001471AP2/ERF domain
CDDcd000187.20E-343187No hitNo description
PfamPF008474.0E-133180IPR001471AP2/ERF domain
SMARTSM003803.3E-393194IPR001471AP2/ERF domain
PROSITE profilePS5103223.9333188IPR001471AP2/ERF domain
SuperFamilySSF541715.89E-223189IPR016177DNA-binding domain
PRINTSPR003672.8E-103243IPR001471AP2/ERF domain
PRINTSPR003672.8E-105470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MRRNAEILQA KPKPMKVKEA PPPVDSTGVR KFRGVRQRPW GKWAAEIRDP SRRVRLWLGT  60
YDTAEEAAMV YDNAAIKLRG PDALTNFSTP TVTEISPETN VMSLSGYDSV DESHNLTSPT  120
SVLRFRSSHS SEDGEPTRSG LVQCSDQEVD PDGSAEGEGS LIKSVDAPNE PVPEIGSCNG  180
PVVEVDEYEG ETNMVPDYSS DLWPMDIPFL DDFFNFQPQD HKLFDNEQVL AGGFPGSMLF  240
DDIPALDTSL QDAEFRGFKE CQEFSPLQVD DFLQDMSDEF ASVDALMAIS IA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-213087159ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV54376.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084481.11e-106ethylene-responsive transcription factor CRF4-like
TrEMBLA0A2Z7DAV40.0A0A2Z7DAV4_9LAMI; Uncharacterized protein
STRINGMigut.F00247.1.p1e-92(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.18e-43cytokinin response factor 4