PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV54169.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HSF
Protein Properties Length: 287aa    MW: 33363.2 Da    PI: 8.44
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV54169.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind64.33e-2035540101
                   THHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXX CS
  HSF_DNA-bind  40 vLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkk 101
                   +LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +gkk+ll++++r +
    KZV54169.1   3 LLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGKKHLLKNVRRTQ 55 
                   69*************************999.........********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467853.26E-17253IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004476.5E-17353IPR000232Heat shock factor (HSF)-type, DNA-binding
SMARTSM004151.3E-13354IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.2E-10315IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.106.2E-20349IPR011991Winged helix-turn-helix DNA-binding domain
PROSITE patternPS004340428IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.2E-101628IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MYLLPKYFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEGF LRGKKHLLKN VRRTQCPSSQ  60
MSINQGLGSC VEVGSFGLDE EIDRLRRDKQ VLAMELVKLR QEQQATLQCL RAMEQKLKVT  120
EMKQKQTMSF LVKAIQSSTF LQQILRYKEE QNVVEELMSK KRRTRILDHV SKNVGLEECP  180
RWESTNWSTL IGIGFSELGQ GNMKYAYKND VGIGRMEDFY GKIQPQVYGQ VPRYGDLELE  240
KLALSMQKPQ VIMEGKSSEN GDFKPTDEGF WQELIDAGID EIGETWC
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV54169.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552814.11e-85heat stress transcription factor A-2c
TrEMBLA0A2Z7D6L60.0A0A2Z7D6L6_9LAMI; Heat stress transcription factor A-6b-like
STRINGXP_009350363.14e-76(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57224113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.13e-67heat shock transcription factor A6B