PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV54134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | B3 | ||||||||
Protein Properties | Length: 228aa MW: 25558.5 Da PI: 8.8467 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 42.7 | 9.9e-14 | 107 | 216 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT.........---.....--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkke...esktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFk.. 83 f k l++ v++ grl+l+ + a+++ + ++ tl++ d + r+W++ l+ ++ ++ y+l++ Wk+Fv+ +gL gD++ F+ KZV54134.1 107 FRKSLSSTAVSQDGRLYLSHQEAATIpccpqmtedT---RdsfRKSTLMVFDGQDRQWSMVLTGYNYENQilYTLSGDWKSFVRTHGLSRGDTICFYkn 202 789999999****************9***9887662...13345569***************9988888899*************************44 PP E-SS.SEE..EEEE CS B3 84 ldgr.sefelvvkv 96 +d r + ++v++ KZV54134.1 203 HDPRvAAGYYYVML 216 44334455555555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.65E-12 | 102 | 222 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 6.0E-12 | 103 | 219 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.36E-10 | 106 | 218 | No hit | No description |
PROSITE profile | PS50863 | 10.926 | 107 | 220 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 3.6E-5 | 107 | 220 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.1E-9 | 107 | 217 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence Send to blast |
MADGRNTDSG GRRTLNLDLN IPYRGAATGS THDATASASD IGTSNDQNEP VSQERKPSNL 60 PLNVLPIKKR RRPDEEPISL ENASQNPAGE QMPGPGSRRL PPEAYCFRKS LSSTAVSQDG 120 RLYLSHQEAA TIPCCPQMTE DTRDSFRKST LMVFDGQDRQ WSMVLTGYNY ENQILYTLSG 180 DWKSFVRTHG LSRGDTICFY KNHDPRVAAG YYYVMLFRKR IVQTTAVR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV54134.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2Z7D3E7 | 1e-171 | A0A2Z7D3E7_9LAMI; Uncharacterized protein |