PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV54105.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | GRAS | ||||||||
Protein Properties | Length: 758aa MW: 85643 Da PI: 6.5152 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 383.3 | 2.8e-117 | 386 | 756 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 ++lL+ cA+av+++d + a+++L++++e+a+p+gd mqRla+yf+ +L+ar+a+s++++yk+l +ts ++ l+a++++ ++P+ k s++ aN+ KZV54105.1 386 RTLLTLCAQAVAADDRRTANEFLKQIREHATPTGDGMQRLAHYFADGLEARMAGSGTQIYKSLLNIPTS---AADILKAYHIYLATCPFRKTSNFFANK 481 789************************************************************999988...8************************** PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197 +I++ +++++++HiiDf+i +G+QWp++lq L+sRp+gpp+lRiTg++ p +g ++++eetg+rL+++A+++++pfefn+ +a+++e+++l++L+++ KZV54105.1 482 TIMNVAAKATKLHIIDFGILYGFQWPCFLQRLSSRPGGPPKLRITGIDFPCPGfrPSQRVEETGRRLENYARTFNIPFEFNA-IAQKWETIKLKDLKIN 579 **************************************************99999***************************.7*************** PP GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296 ++E+l+Vn+ ++l +llde+v ++s+r+ v++l+++++P+v+v + n++ F +rf eal +ys++fd+l+a++pre +er+ +E+ ++gre++n KZV54105.1 580 KDETLVVNSLYRLRNLLDETVIVNSPRNIVINLIREMNPTVFVQGIMNGAFNAPFFITRFREALFHYSSFFDMLDANIPRECHERMLLEKTIFGREAMN 678 *************************************************************************************************** PP GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 v+ace aer+er et+++W++r ++aGF+++pl++++ k++k ++ ++++ + ++e+ +++++gWk+r +++++ W+ KZV54105.1 679 VIACEAAERIERPETYKQWQARCMRAGFEQLPLDKEIKKTVKDKVESFYNKDFVIDEDCHWMLQGWKGRIVYALTTWK 756 *************************************************999*************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50985 | 67.592 | 359 | 736 | IPR005202 | Transcription factor GRAS |
Pfam | PF03514 | 9.8E-115 | 386 | 756 | IPR005202 | Transcription factor GRAS |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009410 | Biological Process | response to xenobiotic stimulus | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol |
Sequence ? help Back to Top |
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Protein Sequence Length: 758 aa Download sequence Send to blast |
MDQNYRRHRE PTSGIKVNTK AVPVFSDPIK VHNQAVPVFS DPNLNNGSRV GGQFFDWNVD 60 NEPVPYCSNL DVTDQLSECD SHEDCDFSDV VLKYINHILM EEDVEEKSCM FQESAALQAA 120 EKSFFDVLGE QQPAPAVYQQ TPMLHHGGME NLDANSVEEG VHSRGVGDLR ILCPDLFSES 180 NSDDGFERRP VTVNSVSQTI SQSCYSSSSS SGTVLDCQVD SPISILGIPD IFTDSQSIMQ 240 FKRGFEEASK FLPDEGNLMV DLSYDKPFQK ERKEGSAGLA VKVEKNLHIE ESADVSRGKK 300 NSFHDNMGVE EARSKKQSAV YTESTVSSEM FDQVLLCSKG KNLSDLRRAL DEISKKNTAN 360 VQSKGLNSGK TQGKKSGSKR NVVDMRTLLT LCAQAVAADD RRTANEFLKQ IREHATPTGD 420 GMQRLAHYFA DGLEARMAGS GTQIYKSLLN IPTSAADILK AYHIYLATCP FRKTSNFFAN 480 KTIMNVAAKA TKLHIIDFGI LYGFQWPCFL QRLSSRPGGP PKLRITGIDF PCPGFRPSQR 540 VEETGRRLEN YARTFNIPFE FNAIAQKWET IKLKDLKINK DETLVVNSLY RLRNLLDETV 600 IVNSPRNIVI NLIREMNPTV FVQGIMNGAF NAPFFITRFR EALFHYSSFF DMLDANIPRE 660 CHERMLLEKT IFGREAMNVI ACEAAERIER PETYKQWQAR CMRAGFEQLP LDKEIKKTVK 720 DKVESFYNKD FVIDEDCHWM LQGWKGRIVY ALTTWKPS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5hyz_A | 7e-50 | 385 | 756 | 5 | 375 | GRAS family transcription factor containing protein, expressed |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV54105.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011085020.1 | 0.0 | scarecrow-like protein 14 | ||||
Refseq | XP_011085021.1 | 0.0 | scarecrow-like protein 14 | ||||
Refseq | XP_011085022.1 | 0.0 | scarecrow-like protein 14 | ||||
Refseq | XP_011085023.1 | 0.0 | scarecrow-like protein 14 | ||||
Refseq | XP_011085025.1 | 0.0 | scarecrow-like protein 14 | ||||
Swissprot | Q9XE58 | 0.0 | SCL14_ARATH; Scarecrow-like protein 14 | ||||
TrEMBL | A0A2Z7D3W7 | 0.0 | A0A2Z7D3W7_9LAMI; Scarecrow-like protein 14-like | ||||
STRING | Migut.F00778.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA276 | 24 | 191 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 0.0 | SCARECROW-like 14 |
Publications ? help Back to Top | |||
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