PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV53808.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 581aa    MW: 66817.5 Da    PI: 5.8775
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV53808.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM182.31.2e-5661331128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s + 
  KZV53808.1   6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-QM 102
                 79****************************.99***************6434555777**************************************.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 ++vg+kktLv+y+grap+g++tdWvmheyrl
  KZV53808.1 103 RAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133
                 99***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-644156IPR003441NAC domain
PROSITE profilePS5100561.9976156IPR003441NAC domain
PfamPF023654.1E-307133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    Send to blast
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRAVGMKKT LVYYRGRAPH  120
GSRTDWVMHE YRLDERECET NTGLQDAYAL CRIFKKSLNI GPKVTGDEYV TTTSDRSSGA  180
NDHRPHHHLY NSGEDVDNIV TGPSNDARWM QYLSEEAFSF PNAYSNCNPI PYPPSKVDIA  240
LECARLQHRF SLPPLEVQHL SHADFCRDPT FSHPSPMFDD QNTNQTDILE EILSVAQASH  300
NLQNLDAWTA GAYAPADRDF SFFTHSNNPP IPDISSSGYM NNLREEQIRR PIEIEDKDEA  360
FNSERMVENL RWVGMSNKEF DKNFLDEFKS VPIDNISSIQ REDHDFQGET SNQDFKNNQI  420
FEGLVNENAS DNFFVDDDRD MDDFSSTPNF ESYEKIQINH GLLISTRQAP NTFYHRVVPS  480
KTVQVHHNPV ACHQFPITRS KNSGICDKFV SFPASTVFEF LRAMKPWSLM IQSCQRDHQE  540
NDQGTNIGFK GWSFCDEILS TIRPYLALAL ALFVTPFSHN L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-56115612165NO APICAL MERISTEM PROTEIN
1ut4_B5e-56115612165NO APICAL MERISTEM PROTEIN
1ut7_A5e-56115612165NO APICAL MERISTEM PROTEIN
1ut7_B5e-56115612165NO APICAL MERISTEM PROTEIN
4dul_A5e-56115612165NAC domain-containing protein 19
4dul_B5e-56115612165NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00212DAPTransfer from AT1G65910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV53808.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096933.10.0NAC domain-containing protein 45
TrEMBLA0A2G9GMX50.0A0A2G9GMX5_9LAMI; Uncharacterized protein
STRINGMigut.K00745.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14952348
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-146NAC domain containing protein 28