PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV52968.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | NAC | ||||||||
Protein Properties | Length: 194aa MW: 22371.5 Da PI: 9.4121 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 105.6 | 6.2e-33 | 10 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 l pG+rF+P+d+el++eyLkkk+++++ ++ i +++iyk P++L + + ee ewyf ++r++ +r++ +gyWka g++k++++ ++ KZV52968.1 10 LSPGYRFSPKDHELINEYLKKKIDSQTDPCL-NIFTTNIYKNSPRELTAlYPSMEEGEWYFLTPRNRG------DQRVAGNGYWKAYGTEKQIHH-NNI 100 579************************9994.59999**********9524444666*******9885......57999****************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g k++L fy+g+ pk++k++Wv++ey++ KZV52968.1 101 CIGSKRSLKFYEGKPPKSKKSNWVIEEYAV 130 9***************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.35E-41 | 7 | 154 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 39.798 | 10 | 155 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-21 | 12 | 129 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MDSTGLVLSL SPGYRFSPKD HELINEYLKK KIDSQTDPCL NIFTTNIYKN SPRELTALYP 60 SMEEGEWYFL TPRNRGDQRV AGNGYWKAYG TEKQIHHNNI CIGSKRSLKF YEGKPPKSKK 120 SNWVIEEYAV DKQQEDAINM MQIHEDYVLC RIRMSLRSKK EAAASKSCET KKQKAKSSRL 180 PLIHEDDGLS LSTK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-27 | 8 | 152 | 13 | 165 | Stress-induced transcription factor NAC1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV52968.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2Z7D6T0 | 1e-143 | A0A2Z7D6T0_9LAMI; NAC transcription factor 29-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA746 | 24 | 103 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 7e-33 | NAC domain containing protein 47 |