PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV51986.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | MYB_related | ||||||||
Protein Properties | Length: 239aa MW: 26929.7 Da PI: 9.2267 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46 | 1.2e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l++ + G +W+++++ g+ R++k+c++rw +yl KZV51986.1 14 KGPWTGEEDQKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.7E-20 | 5 | 63 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 19.55 | 9 | 65 | IPR017930 | Myb domain |
SMART | SM00717 | 6.2E-12 | 13 | 63 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 1.3E-13 | 14 | 61 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 1.7E-18 | 15 | 90 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 7.26E-10 | 16 | 61 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.2E-5 | 64 | 90 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MGRQPCCDKV GLKKGPWTGE EDQKLINFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SEYEEKMVID LHAKLGNRHT QPATIQDGGY SQGGQQPTEP RPTVTPRRRL 120 HTEVTSSPHQ PSPATPEATT MHRDSPQALE PSPAPTRRSG YTQSWVAYTQ ELQYLLQYMI 180 NRVAYTPRSS DPPINILVID RRTSSLAQTY LSPEDRALDT LTHIPRDILC GSRLGDTPL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1a5j_A | 7e-15 | 12 | 95 | 5 | 87 | B-MYB |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV51986.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2Z7D4C2 | 1e-176 | A0A2Z7D4C2_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12 | 24 | 2154 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66230.1 | 8e-60 | myb domain protein 20 |