PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV51914.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 159aa MW: 17645.8 Da PI: 10.161 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.5e-17 | 83 | 134 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrdp+ ng +r++lg++ + +Aa+a++ a+ +++g+ KZV51914.1 83 RYRGVRRRP-WGKYAAEIRDPNRNG--RRVWLGTYYNEIDAARAYDCAAFRMRGN 134 7********.**********96665..**********99**************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 1.3E-31 | 83 | 147 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.95E-22 | 83 | 143 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.2E-29 | 83 | 142 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.0E-11 | 83 | 133 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.696 | 83 | 141 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.2E-13 | 84 | 95 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.57E-20 | 91 | 141 | No hit | No description |
PRINTS | PR00367 | 4.2E-13 | 123 | 143 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009409 | Biological Process | response to cold | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:1902074 | Biological Process | response to salt | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence Send to blast |
MATSDSSSTL DLIRQHLLGD FTSDLNPIDF TSSVPDSSSD LSQPDFLIAP YPKRPSDLSA 60 MAAKAVPETT PVRPDAVAAV GRRYRGVRRR PWGKYAAEIR DPNRNGRRVW LGTYYNEIDA 120 ARAYDCAAFR MRGNRAILNF PMEAGTSGPP ENTVRKGRR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 5e-27 | 79 | 142 | 1 | 64 | ATERF1 |
3gcc_A | 5e-27 | 79 | 142 | 1 | 64 | ATERF1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV51914.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021905462.1 | 3e-45 | ethylene-responsive transcription factor ERF106 | ||||
Swissprot | Q8VY90 | 5e-36 | EF105_ARATH; Ethylene-responsive transcription factor ERF105 | ||||
TrEMBL | A0A2Z7D4J2 | 1e-112 | A0A2Z7D4J2_9LAMI; DNA binding protein | ||||
STRING | evm.model.supercontig_13.253 | 2e-45 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 1e-28 | ERF family protein |
Publications ? help Back to Top | |||
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