PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV51579.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | NAC | ||||||||
Protein Properties | Length: 270aa MW: 30663.8 Da PI: 7.1117 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 132.2 | 3.7e-41 | 2 | 110 | 17 | 128 |
NAM 17 eyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapk 115 +yL++k++++++++ +i+e+d+yk++Pw+Lp + +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + + vg+kk Lvfy+g+ap+ KZV51579.1 2 HYLCRKCASQPISV-PIIAEIDLYKYNPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGN--PKPVGIKKALVFYSGKAPR 97 8*************.88***************6555679*************************************98..789**************** PP NAM 116 gektdWvmheyrl 128 gekt+W+mheyrl KZV51579.1 98 GEKTNWIMHEYRL 110 ***********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.01E-50 | 1 | 137 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 49.97 | 1 | 137 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-17 | 2 | 110 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence Send to blast |
MHYLCRKCAS QPISVPIIAE IDLYKYNPWE LPGLALYGEK EWYFFSPRDR KYPNGSRPNR 60 AAGSGYWKAT GADKPIGNPK PVGIKKALVF YSGKAPRGEK TNWIMHEYRL ADVDRSARKK 120 NNSLRLDDWV LCRIYNKKGT IEKHAPHVIT REMTHAVTPD EDTKPVIVTS LADSSPAAVY 180 EDLMYLDVSD SIPRLNPDSS ASEHVLSPEF ASAAEVESAP KLSEWERSFD FNQFSYLDAT 240 APMDLLGTQF QSCYQTEPPS EMFPFLRKPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-67 | 2 | 143 | 31 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00121 | DAP | Transfer from AT1G01720 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV51579.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011069419.1 | 1e-141 | NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-114 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2Z7D432 | 0.0 | A0A2Z7D432_9LAMI; NAC domain-containing protein 2-like | ||||
STRING | XP_009795736.1 | 1e-135 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1239 | 24 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-116 | NAC family protein |