|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
KZV51240.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
|
Family |
GRAS |
Protein Properties |
Length: 550aa MW: 61012.6 Da PI: 5.8776 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
KZV51240.1 | genome | CNU | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 401 | 1.2e-122 | 170 | 550 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdle..........laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89
l++lL++cAe vs+ d + +a+ lL l ++s +gdp+qRl ay++e+L+arl++s+s +yk+l+++e + sse ++++++++e++P
KZV51240.1 170 LKQLLVACAETVSEADSNssedrrfafsAAEVLLDMLGRRVSVYGDPLQRLGAYVLEGLKARLLSSGSIIYKKLNCNEPA---SSELMSYMHVLYEICP 265
6799********996655455666777799*************************************************9...99************** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
++kf+++ aN I ea+ +e+r+H+iDf+i qG QW++++q+L+sRp+gpp lRiTgv++ es + le + +rL ++Ae++gvpfef+ + +
KZV51240.1 266 YYKFAYVSANAVIREAMVNESRIHVIDFQIAQGSQWVSFIQSLSSRPGGPPYLRITGVDDLESAhaRGGGLELVCQRLGSVAEACGVPFEFHG-AGMSG 363
************************************************************9988889999***********************.88899 PP
GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
++++e+L+v++gE+laVn+ + lh+++desvs++++rd++L+lvk+lsP++v+++eqe+++n++sF++rfle+l++y+a+f+s++a r++++ri+
KZV51240.1 364 CEVHYENLKVRKGESLAVNFPYILHHMPDESVSTTNHRDRLLRLVKNLSPRIVTLSEQESNTNTSSFFQRFLETLDFYTAIFESIDAVRLRDDRQRIST 462
99***********************************************************************************99989********* PP
GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
E++++g++ivn++aceg +r erhe l+kWr rl++aGF+pvpl++++ ++a+ +lr ++++ yr+ e +g+l+lgWk+r+L++ SaWr
KZV51240.1 463 EEHCVGKDIVNIIACEGIDRLERHELLGKWRLRLTMAGFSPVPLNSSVSNTARDVLRDYSKN-YRIAEANGALYLGWKNRALYTSSAWR 550
************************************************************66.*************************8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 550 aa
Download sequence Send
to blast |
MKESWALQAS AKSSIVDNQS MEQVKPSRVS TFQVLNDDPT QSKSRGIDVS SPAYTEEFFT 60 LESTPVTGDP ISNSSAAVSI SSNRSDLSSH CSQSYASDLH HSCDYTCDSS FDSSAVIDNE 120 AKLMHALWML RNDLLGPESG DSGSFSGVTT HPLSSARYNK ILEMAAPMDL KQLLVACAET 180 VSEADSNSSE DRRFAFSAAE VLLDMLGRRV SVYGDPLQRL GAYVLEGLKA RLLSSGSIIY 240 KKLNCNEPAS SELMSYMHVL YEICPYYKFA YVSANAVIRE AMVNESRIHV IDFQIAQGSQ 300 WVSFIQSLSS RPGGPPYLRI TGVDDLESAH ARGGGLELVC QRLGSVAEAC GVPFEFHGAG 360 MSGCEVHYEN LKVRKGESLA VNFPYILHHM PDESVSTTNH RDRLLRLVKN LSPRIVTLSE 420 QESNTNTSSF FQRFLETLDF YTAIFESIDA VRLRDDRQRI STEEHCVGKD IVNIIACEGI 480 DRLERHELLG KWRLRLTMAG FSPVPLNSSV SNTARDVLRD YSKNYRIAEA NGALYLGWKN 540 RALYTSSAWR
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |