PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV50957.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family TCP
Protein Properties Length: 349aa    MW: 38898.7 Da    PI: 9.1056
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV50957.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP158.14.9e-49882372136
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec.........eaesssssas 83 
                 ++kkdrhski T++g RdRRvRls+++a++fFdLq++LGfdk+skt+eWLl+++k aik+l+ t        s+ss+sec         e+        
  KZV50957.1  88 TVKKDRHSKILTSQGSRDRRVRLSIDIARKFFDLQEMLGFDKPSKTLEWLLTKSKVAIKDLVHTkksssasrSTSSPSECevvlmgeafEN-------- 178
                 79**************************************************************665555443333355544433322111........ PP

         TCP  84 nsssg...........kaaksaakskksqksaasalnlakesrakarararertrekmriknkl 136
                     g           +a+ +a+k k  +++++sa++lakesrakarararert+ekm+ik+ l
  KZV50957.1 179 ----GscslgadsnrrSASMNANKCKGGKDPTQSASALAKESRAKARARARERTKEKMCIKK-L 237
                 ....1333444444443333333666666666677*************************94.4 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.8E-4389233IPR005333Transcription factor, TCP
PROSITE profilePS5136934.96190148IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137012.537214231IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MFSKSSYFHP SQVPQSLQSR GPTSTVDLIN GAEILLHDHH QQQQDMLSDH YLATNAPFLD  60
VSTLYNQDVG GRNEDPSALA NTFSRKQTVK KDRHSKILTS QGSRDRRVRL SIDIARKFFD  120
LQEMLGFDKP SKTLEWLLTK SKVAIKDLVH TKKSSSASRS TSSPSECEVV LMGEAFENGS  180
CSLGADSNRR SASMNANKCK GGKDPTQSAS ALAKESRAKA RARARERTKE KMCIKKLNES  240
RNMGFDLNPS VPVQRNNLYE VCRPSASNSQ PILHCPVTNE ATAAATEDLI QESNVIKRML  300
RNHPSFFGFH CSLPSPIVDE NWDVSSLTSQ SNLCDILDQQ KFFNRSSDL
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator involved in the dorsovental asymmetry of flowers. Promotes dorsal identity. {ECO:0000269|PubMed:10571179}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV50957.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551451.11e-104transcription factor DICHOTOMA-like
SwissprotQ9SNW82e-88DICH_ANTMA; Transcription factor DICHOTOMA
TrEMBLA0A2Z7CY860.0A0A2Z7CY86_9LAMI; Transcription factor CYCLOIDEA
STRINGMigut.K00858.1.p9e-66(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43332244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.23e-27TCP family protein
Publications ? help Back to Top
  1. Luo D, et al.
    Control of organ asymmetry in flowers of Antirrhinum.
    Cell, 1999. 99(4): p. 367-76
    [PMID:10571179]