PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV50707.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family GATA
Protein Properties Length: 529aa    MW: 58878.1 Da    PI: 7.6
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV50707.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA34.23.4e-11127935
        GATA  9 TplWRrgpdgnktLCnaCGlyyrkkgl 35
                TplWR+gp  ++ LCnaCG ++r kg+
  KZV50707.1  1 TPLWRNGPPEKPILCNACGSRWRTKGT 27
                9*******66666***********997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd002026.83E-11139No hitNo description
PfamPF003206.2E-9127IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.9E-7127IPR013088Zinc finger, NHR/GATA-type
SMARTSM004010.0078139IPR000679Zinc finger, GATA-type
SuperFamilySSF577169.98E-6131No hitNo description
PfamPF139191.7E-9268364IPR028020ASX homology domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    Send to blast
TPLWRNGPPE KPILCNACGS RWRTKGTLAN YTPLHARTEH EELEDYRVSK VKTISIKNKE  60
PKVIKRKYGH NNDDIAEFRG VPPDYGLGFH KGFDKDTSNG SSSGSAISNS ESCVQYGSAD  120
ASDLTGPSQP AVWDTMVPSK KRTCVTRSKP SPVEKLTKDL YTIWHEQWPS LSGSSEEELL  180
LESGKPMVSV EIGHGSVLIR HPNSIAREEE SEASSLSFDN KKHAVNSRHT TFPGLMKDKG  240
IDSSSRAIEK IKRPANPGIE QDRIKRGKDQ LETVQILAHH NSPLCYIDLQ DVLNMDKFLS  300
HLTTEEQKQL LNFLSPVDTL RSQDSLKSMF DSPQFKENLL SFQRLLSEGV FDNSLSGLKI  360
EDYRTLKKLI LFNSTKSKWV EHYQIFKELK GKNCEKGSEV AGTSNTLPAD YSSCVKPTQD  420
GQHQKLPGAN AVMKSPRRIT TKPSYDQKEL TDNDGSFFSP KRLFSSPIDN VSLVLDSSCF  480
ADESSEQELL LDIPSSGSFP QAELLIPTSS FGAQASTSSS SVFSNLNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV50707.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070264.10.0GATA transcription factor 26
TrEMBLA0A2Z7CXJ90.0A0A2Z7CXJ9_9LAMI; GATA transcription factor 26-like (Fragment)
STRINGXP_009772103.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20892462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.31e-110GATA transcription factor 26