PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV49760.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 373aa    MW: 41111.9 Da    PI: 6.1696
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV49760.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20163212255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  KZV49760.1 163 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 212
                 59******9.**********965...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.12E-33162222No hitNo description
SMARTSM003809.7E-38163226IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-32163221IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-23163221IPR016177DNA-binding domain
PROSITE profilePS5103223.143163220IPR001471AP2/ERF domain
PfamPF008473.8E-14164212IPR001471AP2/ERF domain
PRINTSPR003673.7E-11164175IPR001471AP2/ERF domain
PRINTSPR003673.7E-11186202IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MAATLDAYSS CSNQIFSTDP LREELMQALE PFMKSASSST NISPVSPFDS FPCSSFFSGS  60
SNMYPDFGSF SSKTHENVFL PVFCGVNQPG NEPTVSYSSI GLNQLTPSQI LQIQAQFQQI  120
QAQLQVQQHE IQRGLNKNTF SRYLSPTPVP MKQRGNLPKP TKLYRGVRQR HWGKWVAEIR  180
LPKNRTRLWL GTFDTAEEAA LAYDKAAYKL RGDFARLNFP HLKHQLCQDF SGFKPLHSSV  240
DAKLEAICQN LAILQNQGNS GKTSSAVSDK KIKSLAQNDE PKLENLTSEA SNENLSCPGL  300
IGAVKVETSL SSGSPSDETS SPSSSSALSG SGSGSSPEPD DFFFHFTESS FDPFDNPMLQ  360
KFPSVEIDWE SLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-22162220160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV49760.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097593.11e-108ethylene-responsive transcription factor RAP2-4
TrEMBLA0A2Z7CRP20.0A0A2Z7CRP2_9LAMI; Uncharacterized protein
STRINGPOPTR_0005s07900.13e-89(Populus trichocarpa)
STRINGMigut.L00108.1.p2e-89(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16102471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.18e-47ERF family protein