PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV48393.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

bHLH

Protein Properties

Length: 513aa MW: 56790 Da PI: 8.2686

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV48393.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.9	2e-09	273	320	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y+ksLq KZV48393.1 273 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVKSLQ 320 8***********************9....677***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.36E-16	267	334	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	8.66E-10	267	324	No hit	No description
Gene3D	G3DSA:4.10.280.10	8.4E-16	269	334	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.764	269	319	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.7E-6	273	320	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	7.0E-10	275	325	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence Send to blast
MEKEYFPNHG IPRSQFEKAI PNAWNPVISS TVQRSFVDPT SSAEQFPHFV SAASLPSVAS 60 SSSGLYGDCF LLGELIGKLG GLPIASSVTA QLPYHEMNND GVTDPQHDPI GIPEAASKFS 120 CFGSGSFNSR ISQPFRQNNA EMSPSMANAK AAGILSSPCL KRAGSSVESM NYSQELRPLD 180 KKRTSFSGSC LNFNEESSVS KTSNELDHRK RKSATSSAHS KEDDPILAKG FEGDQEANTK 240 RSKKCTKSGK NDTAEPPKDY IHVRARRGQA TDSHSLAERV RREKISERMK LLQDLVPGCN 300 KVTGKALMLD EIINYVKSLQ CQVEFLSMKL SSVNPDLDID IISKNMLQQT AILQPQVQQI 360 LHPLDPSAAF FNHQNSQQLI DPLTHIDPFG ENIHQFRAFG EDDLHSIVQM SLGLDPVKDL 420 TLYPQNFPEA SWSVQEQNKS SCEQEQMRSE DWKEKPRSAK GHMNTRAGHM KKQPAEIQAR 480 KPTGKKPAGR PDQKLCAKSD KLVCALSEYK KTN

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence Send to blast

MEKEYFPNHG IPRSQFEKAI PNAWNPVISS TVQRSFVDPT SSAEQFPHFV SAASLPSVAS  60
SSSGLYGDCF LLGELIGKLG GLPIASSVTA QLPYHEMNND GVTDPQHDPI GIPEAASKFS  120
CFGSGSFNSR ISQPFRQNNA EMSPSMANAK AAGILSSPCL KRAGSSVESM NYSQELRPLD  180
KKRTSFSGSC LNFNEESSVS KTSNELDHRK RKSATSSAHS KEDDPILAKG FEGDQEANTK  240
RSKKCTKSGK NDTAEPPKDY IHVRARRGQA TDSHSLAERV RREKISERMK LLQDLVPGCN  300
KVTGKALMLD EIINYVKSLQ CQVEFLSMKL SSVNPDLDID IISKNMLQQT AILQPQVQQI  360
LHPLDPSAAF FNHQNSQQLI DPLTHIDPFG ENIHQFRAFG EDDLHSIVQM SLGLDPVKDL  420
TLYPQNFPEA SWSVQEQNKS SCEQEQMRSE DWKEKPRSAK GHMNTRAGHM KKQPAEIQAR  480
KPTGKKPAGR PDQKLCAKSD KLVCALSEYK KTN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV48393.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011089037.1	2e-97	transcription factor bHLH62 isoform X1
TrEMBL	A0A2Z7CNP1	0.0	A0A2Z7CNP1_9LAMI; Basic helix-loop-helix family protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1057	23	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	3e-68	bHLH family protein