PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV47658.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 654aa    MW: 72854.1 Da    PI: 8.0973
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV47658.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.35e-31202259260
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 +Dgy WrKYGqK+vkgse+prsYY+Ct+++C vkkkvers+ d++++ei+Y+g+Hnh+k
  KZV47658.1 202 EDGYYWRKYGQKHVKGSEYPRSYYKCTHSSCLVKKKVERSH-DGHITEIVYKGSHNHPK 259
                 7****************************************.***************85 PP
2WRKY106.41.5e-33386444159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK+vkg+++prsYY+Cts++Cpv+k+ver+a+d k v++tYeg+Hnhe
  KZV47658.1 386 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSPSCPVRKHVERAANDLKSVITTYEGKHNHE 444
                 59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.2E-26197260IPR003657WRKY domain
SuperFamilySSF1182902.62E-24200260IPR003657WRKY domain
SMARTSM007742.7E-33201259IPR003657WRKY domain
PfamPF031061.1E-23202258IPR003657WRKY domain
PROSITE profilePS5081123.984202260IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-36371446IPR003657WRKY domain
SuperFamilySSF1182901.7E-28379446IPR003657WRKY domain
PROSITE profilePS5081137.149381446IPR003657WRKY domain
SMARTSM007747.8E-38386445IPR003657WRKY domain
PfamPF031062.2E-25387444IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    Send to blast
MESNHIGDIS RSPSSAPMNN RNQEIYHRPP PPHVDQHENI VTDRGGGGSI AERRAAKCGF  60
NVRNMNVQPR FLIRTTHTPP HLTSPTLLRS PYFTVPPGIS PSALLDSPVM LPNAQGSQLS  120
PTTGTFQFPS PNHDKLKIQW KLAADGNMEP CSVANNYTRP QNKAVEKYFG YPVDLQESEK  180
KELVEKQQKG AYFPKEVTRS SEDGYYWRKY GQKHVKGSEY PRSYYKCTHS SCLVKKKVER  240
SHDGHITEIV YKGSHNHPKP QPLKRFGADV QDINNETAGS TLTRNIGLDS SSCLNGACAS  300
NPSVHSTFQS DPMNRDFEAQ ELNVVEDQEV ESTESMSFHD EDDDQNDESD SKKRKRESLS  360
IDQTSISRST REPRVVVQIE SEIDILDDGY RWRKYGQKVV KGNPNPRSYY KCTSPSCPVR  420
KHVERAANDL KSVITTYEGK HNHEVPAAAS KNMGAGLVMQ TDHQPPQAAP TSLTEFSSAA  480
TSNNAPKQGA GKQLLQHLPP PMYNLNKTKS FIFNYNDHHL IMRSNSNMAP TTGNNLLNFG  540
SSSANYPVSF PPFHYGSLLM NGNFIKNYPT ANYPINSTGH FPEFMSSMNP VQAAGPAVNG  600
GNFHIGNYGV ACNQAQEMRE CHGKAMKPKE EKRDEGDHIY DSCLSVPNHG NGIM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-35202447878Probable WRKY transcription factor 4
2lex_A2e-35202447878Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV47658.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077170.11e-143probable WRKY transcription factor 20
TrEMBLA0A2Z7CL440.0A0A2Z7CL44_9LAMI; Putative WRKY transcription factor 20
STRINGXP_009598832.11e-107(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57672237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26440.12e-83WRKY DNA-binding protein 34