PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV47290.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ARR-B
Protein Properties Length: 428aa    MW: 48221.7 Da    PI: 5.3453
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV47290.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like70.52.6e-22155203554
     G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                 +Wt+eLHe+Fv+av qL G+ +  Pk+il+lm+v+gLt+ +v+SHLQk R
  KZV47290.1 155 EWTEELHEKFVDAVMQL-GEGRCYPKEILDLMNVPGLTRMQVASHLQKCR 203
                 7****************.9*****************************98 PP
2Response_reg24.21.7e-0976842105
                   HHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HH CS
  Response_reg  42 kdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpe 105
                    ++D+++  i+ p+  G++ll++ ++ +  l ++++ ++++ +++ + l+ Ga  +++Kp+ ++
    KZV47290.1   7 ATFDIVIANINSPDFYGFKLLQQATKMD--LLVMLMLDNEDAATMAKGLEEGAFLCVTKPITMD 68 
                   569*******************988866..99****************************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011018.99178IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23001.6E-9884No hitNo description
SuperFamilySSF521725.27E-9886IPR011006CheY-like superfamily
PROSITE profilePS5129410.806148207IPR017930Myb domain
SuperFamilySSF466891.08E-15149203IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-21153203IPR009057Homeodomain-like
TIGRFAMsTIGR015576.7E-19154203IPR006447Myb domain, plants
PfamPF002496.6E-8155202IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MLSKGKATFD IVIANINSPD FYGFKLLQQA TKMDLLVMLM LDNEDAATMA KGLEEGAFLC  60
VTKPITMDTV KYLWQHVLRE KIWKLKAHRR YGRTAIYDNG FGEEGSEVYM AFENDEEKYH  120
LKGYARGERI RNEDEVSDIE DDMNPGFMKR KVWTEWTEEL HEKFVDAVMQ LGEGRCYPKE  180
ILDLMNVPGL TRMQVASHLQ KCRGGTWLPP NERKYKTGSP GSSSPKEARA PRSRTRRFGS  240
MPIVGINPHD NQEVNQEKST LDHEELYVNS SVGDNSTTSS DAEGYRPHIQ PQDGYNNIPY  300
GHVENNAGEL NMWHLGLSLG MDDSYMSGER FLYGDQVMAG NGVGSGSLSH QGNNARGDTF  360
EFRNGDFMVR NSSASQQEVG ANNYNGNLHA LDLEQLYSMQ IPGVADVRNG QRIHEESGSV  420
GYSKEGQR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV47290.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7CJK30.0A0A2Z7CJK3_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-37response regulator 2