PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV47156.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

bZIP

Protein Properties

Length: 454aa MW: 50535.9 Da PI: 7.2943

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV47156.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.8	1.5e-10	180	214	5	39
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 k rr+++NReAAr+sR+RKka++++Le L+ KZV47156.1 180 KTLRRLAQNREAARKSRLRKKAYVQQLESSRMRLS 214 788*************************8665555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-6	176	240	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.91	178	222	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.13E-7	180	221	No hit	No description
Pfam	PF00170	9.7E-8	180	217	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.4E-7	182	208	No hit	No description
PROSITE pattern	PS00036	0	183	198	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.1E-31	260	335	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence Send to blast
MASTRRVLGE PAALSGISHH LPYSNPHMLH NHPPDTSFGR NQEESSFDFG ELEEPIVLGG 60 VKINKNKTKE TLYSSVKASA ILEMLPSWPI PRQRESSKSG EESTDSGSAL IKPDSESPIS 120 TKAPSDHHKT ARAAAEDDSD REHDDLQPPQ PPLQSPDIQM ESARTGVSQS KSAAKQTTEK 180 TLRRLAQNRE AARKSRLRKK AYVQQLESSR MRLSQLEQDI QSARSQGLFI GGRATTGNIS 240 SAGAVFDMEY SRWLDEDIGH MSELRAAVQS HLSDGDLRAI VDGYVSHYDE IFRLKGVAAK 300 SDVFHLITGT WVTPVERCYL WMGGFRPSEL IKMLIPQLDP LTEQQLLGIC GLQQSSQQAE 360 DALAQGLDQL HQSLLQTIAN SSLNDSMHHM VIALGKLANL EGFVRQADNL RQQTLHQLRR 420 ILTVRQAARC FLVMGEYYGR LRALSSLWAS RPRE

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence Send to blast

MASTRRVLGE PAALSGISHH LPYSNPHMLH NHPPDTSFGR NQEESSFDFG ELEEPIVLGG  60
VKINKNKTKE TLYSSVKASA ILEMLPSWPI PRQRESSKSG EESTDSGSAL IKPDSESPIS  120
TKAPSDHHKT ARAAAEDDSD REHDDLQPPQ PPLQSPDIQM ESARTGVSQS KSAAKQTTEK  180
TLRRLAQNRE AARKSRLRKK AYVQQLESSR MRLSQLEQDI QSARSQGLFI GGRATTGNIS  240
SAGAVFDMEY SRWLDEDIGH MSELRAAVQS HLSDGDLRAI VDGYVSHYDE IFRLKGVAAK  300
SDVFHLITGT WVTPVERCYL WMGGFRPSEL IKMLIPQLDP LTEQQLLGIC GLQQSSQQAE  360
DALAQGLDQL HQSLLQTIAN SSLNDSMHHM VIALGKLANL EGFVRQADNL RQQTLHQLRR  420
ILTVRQAARC FLVMGEYYGR LRALSSLWAS RPRE

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00131	DAP	Transfer from AT1G08320	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV47156.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020552199.1	0.0	transcription factor TGA9 isoform X3
Swissprot	Q93XM6	1e-175	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A2Z7CQQ9	0.0	A0A2Z7CQQ9_9LAMI; BZIP transcription factor family protein isoform 1
STRING	EOY33449	0.0	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3683	23	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-174	bZIP family protein

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]