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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
KZV46489.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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| Family |
BBR-BPC |
| Protein Properties |
Length: 280aa MW: 31174.9 Da PI: 9.6966 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KZV46489.1 | genome | CNU | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 318 | 2.9e-97 | 1 | 280 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllall 85
mddd++ rn+gyyep l+ +lglq+mss+ +rd+k+ + n + ++++a+++rd m++ rd+++++ ++k+l++
KZV46489.1 1 MDDDSM--RNWGYYEPP--LRGHLGLQIMSSLVDRDTKPflsgCD-NSLMVSPNGAFHPRDcvvteppvthMDY-VRDSWINH--------REKFLHMF 85
889855..9********..********************998544.5559************************.9******9........78999999 PP
GAGA_bind 86 lvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad 184
+ + ++l +t+ ++++ l ++ +d + ++ e+l+i +++ ++ kkr+ +++pk++k kk++k ++++k++ + +
KZV46489.1 86 PSTSH--------GSILAETSDAHQSMPLPHQPNTDVKSGM------EELNIL----KKEASPPLKKRAAPANPKNPKGKKPRK-GPVPKDNGDCSV-- 163
94442........3456666666543332332223333332......233332....3445666777888999*********99.889988888887.. PP
GAGA_bind 185 erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpv 283
+r+k k+++d+v+ngv++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtttiS+yPLP+stkrrgaRiagrKmSqgafkk+LekLa+eGy+++ p+
KZV46489.1 164 RRAKVAKRNVDVVINGVDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTTISMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLATEGYNFADPI 262
79************************************************************************************************* PP
GAGA_bind 284 DLkdhWAkHGtnkfvtir 301
DL+ +WAkHGtnkfv ir
KZV46489.1 263 DLRPYWAKHGTNKFVIIR 280
****************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MDDDSMRNWG YYEPPLRGHL GLQIMSSLVD RDTKPFLSGC DNSLMVSPNG AFHPRDCVVT 60
EPPVTHMDYV RDSWINHREK FLHMFPSTSH GSILAETSDA HQSMPLPHQP NTDVKSGMEE 120
LNILKKEASP PLKKRAAPAN PKNPKGKKPR KGPVPKDNGD CSVRRAKVAK RNVDVVINGV 180
DMDISGIPIP VCSCTGTPQQ CYRWGCGGWQ SACCTTTISM YPLPMSTKRR GARIAGRKMS 240
QGAFKKVLEK LATEGYNFAD PIDLRPYWAK HGTNKFVIIR
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
