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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
KZV46418.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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| Family |
BBR-BPC |
| Protein Properties |
Length: 280aa MW: 31367.8 Da PI: 10.2538 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KZV46418.1 | genome | CNU | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 325.6 | 1.4e-99 | 1 | 280 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllall 85
md+d+ rn+gyyep+ +k +lglqlmss+ +r +k+ +++ l + +++++++rd m++ rd+++++ ++k+l++
KZV46418.1 1 MDEDSL--RNWGYYEPS--FKGHLGLQLMSSMVDRHTKPflsgHDNPL-MVPPNGTYHPRDrvaaelpsthMDY-VRDSWINH--------REKFLHMF 85
788855..9******99..**********************9888777.*************************.9******9........78999999 PP
GAGA_bind 86 lvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad 184
++++ + vl +t+ +++ ++ ++++++ + ++ +iee ++ ++ kkr ++ pk++k+kk++k ++++k++ +++
KZV46418.1 86 PTNTF----N----PVLAETSGAHHAMPATH---QPDPTK--D----TESNIEEPSAKKGHV-PAKKRPAPAAPKTTKSKKPRK-GPVPKENGRSSV-- 163
97663....3....45666666665443222...233333..2....334455533333333.4444778899*********99.889988888887.. PP
GAGA_bind 185 erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpv 283
+r+k++kk++d+v+ngv++D+s++P+PvCsCtG+++qCY+WG GGWqSaCCt+tiS+yPLP+stkrrgaRiagrKmSqgafkk+LekLa+eGyd+ n +
KZV46418.1 164 HRAKTSKKNMDVVINGVDFDISGIPIPVCSCTGTSQQCYRWGFGGWQSACCTMTISMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLASEGYDFTNSI 262
79************************************************************************************************* PP
GAGA_bind 284 DLkdhWAkHGtnkfvtir 301
DL+++WAkHGtnkfvtir
KZV46418.1 263 DLRTYWAKHGTNKFVTIR 280
*****************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MDEDSLRNWG YYEPSFKGHL GLQLMSSMVD RHTKPFLSGH DNPLMVPPNG TYHPRDRVAA 60
ELPSTHMDYV RDSWINHREK FLHMFPTNTF NPVLAETSGA HHAMPATHQP DPTKDTESNI 120
EEPSAKKGHV PAKKRPAPAA PKTTKSKKPR KGPVPKENGR SSVHRAKTSK KNMDVVINGV 180
DFDISGIPIP VCSCTGTSQQ CYRWGFGGWQ SACCTMTISM YPLPMSTKRR GARIAGRKMS 240
QGAFKKVLEK LASEGYDFTN SIDLRTYWAK HGTNKFVTIR
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
