PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV46403.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family C2H2
Protein Properties Length: 887aa    MW: 97695.1 Da    PI: 6.3024
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV46403.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.00061120142123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++Cp C+k++s+ ++  +H  ++
  KZV46403.1 120 FECPVCSKVYSSEEEVSVHVESC 142
                 89*****************8876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.10.20.902.0E-102552No hitNo description
SuperFamilySSF1435034.18E-16174255IPR018997PUB domain
SMARTSM005801.1E-14174241IPR018997PUB domain
CDDcd092121.76E-18175256No hitNo description
PfamPF094091.7E-13176242IPR018997PUB domain
SuperFamilySSF542362.22E-13316428IPR029071Ubiquitin-related domain
Gene3DG3DSA:3.10.20.902.0E-10332426No hitNo description
PROSITE profilePS5003312.07344428IPR001012UBX domain
PfamPF007892.7E-6344394IPR001012UBX domain
SuperFamilySSF514453.4E-85457776IPR017853Glycoside hydrolase superfamily
PfamPF003321.9E-85457776IPR000490Glycoside hydrolase family 17
Gene3DG3DSA:3.20.20.801.3E-112457776IPR013781Glycoside hydrolase, catalytic domain
PROSITE patternPS005870691704IPR000490Glycoside hydrolase family 17
SMARTSM007681.3E-42793877IPR012946X8 domain
PfamPF079836.2E-18794864IPR012946X8 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0046658Cellular Componentanchored component of plasma membrane
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 887 aa     Download sequence    Send to blast
MDDVKDKMKG LMKKVNNPFS SSNSGKFKGQ GRVLGSSPHP DQSVSSSLSD SKALPQKMNN  60
TSGPLPRKLS NSSEQKIENK KPEILANEND IEKDGNAFDP FNSLITSGKR NPHGYSLKVF  120
ECPVCSKVYS SEEEVSVHVE SCLSSSGSSN ENVGGETRLQ ACVSAYVSGK PNDSSMEVVM  180
RLFRNVAIDP ENAKFRKIRL GNPKIKEAIG DAPGGIELLE CVGFELKEEG EEMRLTMDVP  240
SEDQLCLINK AISLLDPKKD EKLPSSAPAK IEEDLQPKKV DRQVRVFFSV SESVAAKIEL  300
PASFYNLSAL ELKREAEMRK KKLEDSKLLI PKSYREKQAQ IAKKRYKRTV IRIQFPDGVV  360
LQANFSPSER TGTLYEFVSS ALKQPSLEFE LLHPVLIKRR IIPHFPTAGE KPVTLEDEDL  420
VPAALVKFRP IETDTIVFTA SCTQYHFGGE LRDSAFIGVN IGTALSDMPN PTQVVALLKS  480
QQIRHIRLYD ADRAMLLALA NTGIRVTISV PNDELLGIGQ SNTSAANWVS RNVLAHVPAT  540
NITGIAVGSE VLSTLPNAAP VLVSAMKFIY SALVASNLDS EIKVSTPHSS SIILDSFPPS  600
QAFFNRTWEP VMVPLLKFLQ STGSYLMLNV YPYYDYMQSN GVIPLDYALF RPLSPTKEAV  660
DPNTLLHYTN VFDAVVDAAY FAMSYQNFTN IPIVVTETGW PSKGDSSEQD ATLENANTYN  720
SNLIRHVLNS TGTPKHPGIA VSSYIYELYN EDLRSGPISE KNWGLFNGNG SPVYILRLTN  780
SGTVLANDTT NQTYCVAKEG ADPKMIQAAL DWACGPGKVD CSILLQGQPC YEPDTVVGHA  840
SYAFNAYYHG MGMTDGTCNF NGVAIITTTD PSMRPKLYFM LNFDRYY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cyg_A5e-654577741308beta-1, 3-glucananse
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV46403.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7CI910.0A0A2Z7CI91_9LAMI; Glucan endo-1,3-beta-glucosidase 3
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1011266