PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV45988.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 265aa    MW: 29500.6 Da    PI: 6.9367
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV45988.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.8e-1388131855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  Er RR+++++ f +L  llP++     +K +K++i+ +Av+YIk++q
  KZV45988.1  88 TERERRKKMRNMFGNLHALLPHL----PPKADKSTIVDEAVNYIKKMQ 131
                 7*********************6....39*****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.23680130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.06E-1582145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.73E-1285135No hitNo description
Gene3DG3DSA:4.10.280.107.5E-1485144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-888136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.1E-1088131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048737.60E-4191242No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MAELLGQEDN FLWENQSCPF PNLGDINEEN SGKKLVDITN NSDGQKLAKE EEAPHPEKGK  60
KRSAAACKGG PTTASAGGEP DHELHIWTER ERRKKMRNMF GNLHALLPHL PPKADKSTIV  120
DEAVNYIKKM QETLETLERQ KVEQKPVVRS REAFLADQPS AKMAGPSGPP FFKTWTSPNV  180
TLNICGGDAH ISLCGSRKPA LLSAICYVMD KYRLEVVSAQ LSADANRCIY TFHTRVTGIH  240
GQFQEAFPVE EIYKQAAAEM MYIMA
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV45988.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088240.17e-91transcription factor bHLH95-like isoform X2
TrEMBLA0A2Z7CGF10.0A0A2Z7CGF1_9LAMI; Uncharacterized protein
STRINGXP_009800782.12e-89(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13242369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.18e-38bHLH family protein