PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV45640.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 390aa    MW: 44055.8 Da    PI: 4.404
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV45640.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-195099255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  KZV45640.1 50 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 99
                789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.99E-3249106No hitNo description
SMARTSM003804.1E-3650114IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-2750106IPR001471AP2/ERF domain
PROSITE profilePS5103219.55950107IPR001471AP2/ERF domain
PfamPF008479.5E-145099IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-1950106IPR016177DNA-binding domain
PRINTSPR003675.5E-85162IPR001471AP2/ERF domain
PRINTSPR003675.5E-87389IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MARKRKTCEV LVNDHENVNY KEGDDASWDE MVKEAAAVAA QGGVRRARKR FVGVRQRPSG  60
RWVAEIKDTI QKIRVWLGTF DTAEEAARAY DEAACLLRGA NTRTNFCPVS SNASSTPALP  120
SKITNLLINR LKARNNVLMA NSNPMAASPS SSSSSSSSSS TPSYNHQDMQ TMGYSDDSLP  180
DFSESHFTDF LSEPDDDYSL ENSCMIVSDV HKCQSFEPCT PQTDQGYCEV FEQNPDHFLP  240
ELEMDNRSVK NDTSLEPVDF QFVDEIVSID YSPFEITEEI SKVPMDQEDE PSIFSETMKR  300
MNYERKFSAS LYAFNGITEC LKLKMKSPSD RSDQIARLRN ACKNQDEITL KNHEQEKVLE  360
QDENSEDSMN QDGELLLWNS IDLPPICFVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1443115779Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV45640.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098777.11e-141ethylene-responsive transcription factor 10-like
TrEMBLA0A2Z7CF300.0A0A2Z7CF30_9LAMI; Uncharacterized protein
STRINGcassava4.1_008867m1e-108(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43102037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-23related to AP2 11