PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV45592.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family TCP
Protein Properties Length: 332aa    MW: 37428.3 Da    PI: 8.4731
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV45592.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP159.81.5e-49852312134
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............ 88 
                 ++kkdrhski T++g+RdRRvRls+  a++fFdLq++LGfdk+skt+eWLl+++k+aikel++ + s+a+ c+ ++ ss ++ + ++            
  KZV45592.1  85 TVKKDRHSKIVTSQGPRDRRVRLSIGMARKFFDLQEMLGFDKPSKTLEWLLTKSKAAIKELVQMKKSDATTCTYKRISSPSECEVIElengnyldadyn 183
                 79**************************************************************77777666222222222211111333334555556 PP

         TCP  89 ...kaaksaakskksqksaasalnlakesrakarararertrekmrikn 134
                      ++++   +++++s++ alnlakesrakarararertrekm++k+
  KZV45592.1 184 enlV-MANSYRCRRAKDSQQDALNLAKESRAKARARARERTREKMCMKK 231
                 5542.33333555555555556*************************94 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036347.1E-4486230IPR005333Transcription factor, TCP
PROSITE profilePS5136936.4487145IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137012.483209226IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MFSKNTYLQL PQLSSSLQSR ASTSVDLNGA EFLLHQHHHE ILSGHFVATN TPFLEGSTLY  60
NQDVNGGICE DPNSTMANTF QAKQTVKKDR HSKIVTSQGP RDRRVRLSIG MARKFFDLQE  120
MLGFDKPSKT LEWLLTKSKA AIKELVQMKK SDATTCTYKR ISSPSECEVI ELENGNYLDA  180
DYNENLVMAN SYRCRRAKDS QQDALNLAKE SRAKARARAR ERTREKMCMK KLTESGNIVS  240
DLNPSIPALS EVCKLPTSDT EPSLLFPVAN TAAATEDLIQ ESLVIRRMLK HNSIFAYQQN  300
GNQNWDISNL TPQSNLCDIL DQHRFINSSS NM
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator involved in the dorsovental asymmetry of flowers. Promotes dorsal identity. {ECO:0000269|PubMed:10571179}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00215DAPTransfer from AT1G67260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV45592.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020554786.13e-93transcription factor CYCLOIDEA
SwissprotQ9SNW86e-83DICH_ANTMA; Transcription factor DICHOTOMA
TrEMBLA0A2Z7CEY60.0A0A2Z7CEY6_9LAMI; Transcription factor CYCLOIDEA
STRINGMigut.H00528.1.p5e-69(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43332244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.21e-29TCP family protein
Publications ? help Back to Top
  1. Luo D, et al.
    Control of organ asymmetry in flowers of Antirrhinum.
    Cell, 1999. 99(4): p. 367-76
    [PMID:10571179]