PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV45166.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 236aa    MW: 26311.7 Da    PI: 6.5159
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV45166.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.27.2e-09140180954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++ +L++l+P       +K++ a++L +A++Y+k L
  KZV45166.1 140 ARHRRERISERIRTLQRLVPGG-----TKMDTASMLDEAIHYVKFL 180
                 699*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.472131180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.6E-14136189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-14136190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-14137186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-6141180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.50E-6153185No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010500Biological Processtransmitting tissue development
GO:0048462Biological Processcarpel formation
GO:0080126Biological Processovary septum development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MDSGFLKSEV EDEMELMLME MDFPGAAAAC DQIDPEMGFN SHQENNKGGI IENYHANSQA  60
LMNRISFPGA GTHQETSGGE RWQVEEYCGE TRKRNPSMAA MREMIFRIAA MQPIHVDPES  120
VKPPKRKNVK ISTDPQSVAA RHRRERISER IRTLQRLVPG GTKMDTASML DEAIHYVKFL  180
KDQVQSLEKV EANRPSAATA SGTGFPVPIS SGSYFPVAAY GLHQSYPQSL HNLRDS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV45166.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074418.16e-85transcription factor HEC2-like
TrEMBLA0A2Z7CK491e-177A0A2Z7CK49_9LAMI; Uncharacterized protein
STRINGMigut.N02717.1.p9e-75(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA75223101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.14e-46bHLH family protein