PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV43708.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 343aa    MW: 39219.8 Da    PI: 8.3622
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV43708.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM153.41e-47251452128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp     +e+ewyf+++rdkky++g+r+nr+t+sgyWkatg d+ + s++ + +
  KZV43708.1  25 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELP-----GETEWYFYVPRDKKYRNGDRPNRVTTSGYWKATGADRMIRSESLRSI 117
                 69***************************.89***************.....889***************************************99*** PP

         NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                 glkktLvfy+g+apkg ++ W+m+eyrl
  KZV43708.1 118 GLKKTLVFYSGKAPKGIRSCWIMNEYRL 145
                 **************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.16E-5124165IPR003441NAC domain
PROSITE profilePS5100554.27324166IPR003441NAC domain
PfamPF023658.2E-2526145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MAVAAAMNTE EESSKQDEHE NDMIMPGFRF HPTEEELVEF YLRRKVEGKR FNVELITFLD  60
LYRYDPWELP GETEWYFYVP RDKKYRNGDR PNRVTTSGYW KATGADRMIR SESLRSIGLK  120
KTLVFYSGKA PKGIRSCWIM NEYRLPQHET ERLQKAEISV CRVYKRAGVE NHSCLPRSLP  180
TKGSLSSAIA SKSAKKNNRK TSKASPSSST DIGTTIAHSM LNSFSTNIDS FLPVDSTITL  240
HNSSEHDGII LHQSGSQDCS HPIDQGLHKL VNKYSQQAAP NLRQENQHYS NHCATNILAR  300
FSDLQQQQVD TPSSDFSNRM WDWNAAVCSE ASNKDHHFTN LFK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-512616619165NO APICAL MERISTEM PROTEIN
1ut4_B3e-512616619165NO APICAL MERISTEM PROTEIN
1ut7_A3e-512616619165NO APICAL MERISTEM PROTEIN
1ut7_B3e-512616619165NO APICAL MERISTEM PROTEIN
4dul_A3e-512616619165NAC domain-containing protein 19
4dul_B3e-512616619165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV43708.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022897039.11e-138NAC domain-containing protein 35-like
TrEMBLA0A2G9GEF31e-140A0A2G9GEF3_9LAMI; Uncharacterized protein
STRINGcassava4.1_009166m1e-118(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38882446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.21e-103NAC domain containing protein 35