PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV43485.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 466aa    MW: 52079.9 Da    PI: 4.9926
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV43485.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.54.6e-5291371128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 lp+GfrF+Ptd el+++yL++k++g++ e+  +i+e+d++k+ePwdLp  + + + ++ew+fF+++d+ky++++r+nrat++gyWkatgkd++++skkg
  KZV43485.1   9 LPVGFRFRPTDLELIDHYLRNKINGRDKEV-GAIRELDVCKWEPWDLPdlSVIPSIDNEWFFFCPKDRKYQNSQRSNRATEKGYWKATGKDRNIISKKG 106
                 79*************************999.89**************96436777899***************************************** PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 +++g+kktLvfy+grap+g++t+W++heyr+
  KZV43485.1 107 AKIGMKKTLVFYSGRAPDGKRTHWIIHEYRA 137
                 *****************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.59E-574160IPR003441NAC domain
PROSITE profilePS5100554.3099160IPR003441NAC domain
PfamPF023654.1E-2710136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MAVLPLKALP VGFRFRPTDL ELIDHYLRNK INGRDKEVGA IRELDVCKWE PWDLPDLSVI  60
PSIDNEWFFF CPKDRKYQNS QRSNRATEKG YWKATGKDRN IISKKGAKIG MKKTLVFYSG  120
RAPDGKRTHW IIHEYRATDK SLDGTHPGQA AFVLCRLFKK DDIRQDDSPN LDEVEDIASS  180
PTVTKSSADE AVIQACGGIG MQPPADFKFP LIDSDSSSCP PYPDLEKLLG LCPPIQDPVE  240
WKVFSPMQME LGSPYLCTDS FSGEINGDPN TSPCQCGTNA TDIDIFLNSI LNDPEEQSCA  300
RNVEYSGGSA LETNSSFGPG IMLRTRQTSN QANALDSAEH GIAPRRMHLQ MKLEIGPTQC  360
TLRGDSSDGI KVKDEQESED EESMDLHTLN KLEESTSDET NQDQQSKDLS RSLTPKSKNL  420
DKSHEYVPRV CLQRCGIAPY LYMPMMVVAT SLILILVGAL WYLLKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-42816516170NO APICAL MERISTEM PROTEIN
1ut4_B3e-42816516170NO APICAL MERISTEM PROTEIN
1ut7_A3e-42816516170NO APICAL MERISTEM PROTEIN
1ut7_B3e-42816516170NO APICAL MERISTEM PROTEIN
3swm_A3e-42816519173NAC domain-containing protein 19
3swm_B3e-42816519173NAC domain-containing protein 19
3swm_C3e-42816519173NAC domain-containing protein 19
3swm_D3e-42816519173NAC domain-containing protein 19
3swp_A3e-42816519173NAC domain-containing protein 19
3swp_B3e-42816519173NAC domain-containing protein 19
3swp_C3e-42816519173NAC domain-containing protein 19
3swp_D3e-42816519173NAC domain-containing protein 19
4dul_A3e-42816516170NAC domain-containing protein 19
4dul_B3e-42816516170NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV43485.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075874.11e-142NAC domain-containing protein 62
TrEMBLA0A2Z7C9910.0A0A2Z7C991_9LAMI; Uncharacterized protein
STRINGMigut.F00136.1.p1e-127(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33632448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49530.11e-84NAC domain containing protein 62