PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV43053.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family GRF
Protein Properties Length: 408aa    MW: 45377.6 Da    PI: 8.4077
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV43053.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC61.31.6e-19152194345
         WRC   3 epgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                 ep+rCrRtDGKkWRC r++ + + +CErH h+++ rsrk++e+
  KZV43053.1 152 EPWRCRRTDGKKWRCTRNAAAEQRYCERHSHKNKTRSRKHVEP 194
                 9***************************************997 PP
2QLQ40.58.2e-15104139237
         QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                  FTa+Ql++L +Q ++ Ky++a+ PvP+eL+++i++
  KZV43053.1 104 LFTASQLHELQRQQMIHKYMLASIPVPHELMLPISR 139
                 6*********************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009512.5E-7103139IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166616.229104139IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088802.0E-9105137IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166720.683150194IPR014977WRC domain
PfamPF088792.7E-15152193IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009941Cellular Componentchloroplast envelope
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MWGMMKNRNE MKSTSTECSG VGLGLKMQAE SSEFEKTRAF PFINQYLFDS AGNSTNTTPS  60
TAGGRGFGPF FWDMLSSNQP CGTAEIYATG TPGGGGVAVS EKALFTASQL HELQRQQMIH  120
KYMLASIPVP HELMLPISRA PSSLAGAPQF KEPWRCRRTD GKKWRCTRNA AAEQRYCERH  180
SHKNKTRSRK HVEPKTSTQS PTSLMAPGFD AMPYDQARGV EWCKRGGSSG TAIPISTCDY  240
RQQMQQISSR LDSMNRDNTH HQKNVSRSPT LPQQDFKAPV PNRFEFRHAD YCNSPLPSEM  300
TSFQENYLSL NSNIPTHTTP QFIDAWEQEG IKGLSPSSLT LSMSSSSNRN DETNVIDRRF  360
DDSMGPGGPL GEALCLGNAS ISNWLSPNDY NYTSSSCEDG SHAFKFIR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV43053.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7CEY30.0A0A2Z7CEY3_9LAMI; Growth-regulating factor 8-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125171820
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53660.11e-28growth-regulating factor 7