PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV42120.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 306aa    MW: 33043.9 Da    PI: 4.9524
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV42120.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.74.6e-16134184156
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 s ++G+r  +++g+Wv+e+r+p++   ++r++lg++ tae+Aa+a++ a+++l+g+
  KZV42120.1 134 SVFRGIR--SRSGKWVSEVREPRK---TTRIWLGTYPTAEMAAAAYDVAALALRGN 184
                 6799**6..678******999843...5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541718.5E-18134192IPR016177DNA-binding domain
CDDcd000182.00E-16134193No hitNo description
Gene3DG3DSA:3.30.730.106.9E-27135192IPR001471AP2/ERF domain
PROSITE profilePS5103219.862135191IPR001471AP2/ERF domain
PfamPF008471.1E-9135183IPR001471AP2/ERF domain
SMARTSM003804.6E-27135197IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MADPPHQLNM SQQDHSSLPP SASPSTPPPP PPPPPPPPPR VHTVLRGQVD QSARSGGVER  60
ETQAPALTLP LPLQLPPPSV SPLSPAYSVS SVTQPRLPTH RDQPINLQSP RKLQKVTTMA  120
STSSPSRSNT GKHSVFRGIR SRSGKWVSEV REPRKTTRIW LGTYPTAEMA AAAYDVAALA  180
LRGNEATLNF PENVGRYNIP SSPLPADIRR AAADAAALMK REEEVPGAAE EEAAAEAGEQ  240
QEDDENINAE AVISGRQEFI DEEELFRMPN LLKDMAEGML VSPPRMASPP SDDSPTSSDA  300
ENLWSY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-14126202580Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV42120.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081034.18e-67ethylene-responsive transcription factor ERF026
SwissprotQ9CAN96e-47ERF26_ARATH; Ethylene-responsive transcription factor ERF026
TrEMBLA0A2Z7CBR70.0A0A2Z7CBR7_9LAMI; Uncharacterized protein
STRINGMigut.A00921.1.p3e-59(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.15e-32ERF family protein