PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV41863.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ARR-B
Protein Properties Length: 428aa    MW: 48211.9 Da    PI: 8.2239
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV41863.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like66.25.9e-21241289554
     G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                 +Wt+eLH++F++av+qL G+ +  Pk+il+lm+ +gLt+ +v+SHLQk R
  KZV41863.1 241 EWTQELHAKFMNAVRQL-GEGRCFPKEILDLMDTPGLTRMQVASHLQKCR 289
                 7****************.9*****************************98 PP
2Response_reg48.16.5e-17311341105
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+vd +   +++ +++le   y +v+ ++ +++a+ l+   +  +D+++  ++ p+++G++ll+   +   +lp+i+++a +++ +a +al+ Ga 
    KZV41863.1  31 VLVVDHDTESLMNTAKMLEMCSY-RVTFVELASAAISLISSGKvkFDIVMANVNSPDLHGFKLLQLAVSM--DLPVILMSADDNSFMAMRALENGAF 124
                   89*********************.***************888888*******************987765..5************************ PP

                   EEEESS--HH CS
  Response_reg  96 dflsKpfdpe 105
                    f+ Kp   e
    KZV41863.1 125 LFIKKPATLE 134
                   ******7765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521722.13E-2128152IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.2E-2228159No hitNo description
SMARTSM004485.6E-1429139IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011030.02530144IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.3E-1231135IPR001789Signal transduction response regulator, receiver domain
CDDcd001567.62E-1532144No hitNo description
PROSITE profilePS5129411.289232293IPR017930Myb domain
SuperFamilySSF466894.03E-14237289IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-19239290IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-18240290IPR006447Myb domain, plants
PfamPF002491.1E-6241288IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MTMWDFGGVW GNEGISASMA SFHGVVHEIH VLVVDHDTES LMNTAKMLEM CSYRVTFVEL  60
ASAAISLISS GKVKFDIVMA NVNSPDLHGF KLLQLAVSMD LPVILMSADD NSFMAMRALE  120
NGAFLFIKKP ATLEILRCLW QYVLKERTRI VREKERFQEM AAAANFSARG AEIYNGEDYN  180
GHNCNYGGNN NNMMMMMNNH KGKLGKKKLM GPNGGWREDD GYGSQNHMSG NHKVRRKVCT  240
EWTQELHAKF MNAVRQLGEG RCFPKEILDL MDTPGLTRMQ VASHLQKCRN DNWRSPDERK  300
SQQSSPQASI DINMSNYKPR RFGSMPLLVK PQPEPRSGSE NEASDKTENG TMRPPPAAYE  360
HPQQPGGGRR QPSDDFFSFP DMDCLYQNFS GMPQGSVMNP KAVVPCHMDH AYPAHQVSTK  420
YTQKVKQQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV41863.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072587.11e-132two-component response regulator ARR14-like
RefseqXP_011079700.11e-132two-component response regulator ARR14-like
TrEMBLA0A2Z7CBP50.0A0A2Z7CBP5_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.14e-34response regulator 2