PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV41623.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 775aa    MW: 85004.1 Da    PI: 6.3544
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV41623.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-2090145156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++eLe+lF+ +++p++++r eL+++l L++rqVk+WFqNrR+++k
  KZV41623.1  90 KKRYHRHTPQQIQELETLFKDCPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMK 145
                 688999***********************************************999 PP
2START207.55.1e-652995241206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela++a++elvk+a+ +ep+W +s     +++n +e+ ++f++  +     + +ea+r++g+ + ++  lve+l+d++ +W+e+++    + +t++v+s
  KZV41623.1 299 ELALSAMDELVKMAQTDEPLWIRSLeggtQILNLEEYFRTFTPCIGmkpngFITEASRETGMAIINSLALVETLMDSN-KWTEMFPciisRTSTTDVVS 396
                 57899*************************************9988999*****************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgrlp 177
                 sg      galqlm aelq+lsplvp R++ f+R+++q+++g+w++vdvS+d  ++ ++  + + R+++lpSg+++++++ng+skvtwveh +++++++
  KZV41623.1 397 SGmggsrdGALQLMHAELQVLSPLVPvREVNFLRFCKQHSEGVWAVVDVSIDALRETSSgGPTFSRCRRLPSGCVVQDMPNGYSKVTWVEHSEYDESVV 495
                 *********************************************************99**************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 178 hwllrslvksglaegaktwvatlqrqcek 206
                 h+l+r+lv+ g+ +ga++wvatlqrqce+
  KZV41623.1 496 HQLYRQLVSAGMGFGAQRWVATLQRQCEC 524
                 ***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.84E-2075147IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-2084149IPR009057Homeodomain-like
PROSITE profilePS5007116.87687147IPR001356Homeobox domain
SMARTSM003891.3E-1788151IPR001356Homeobox domain
CDDcd000866.16E-1889148No hitNo description
PfamPF000464.7E-1890145IPR001356Homeobox domain
PROSITE patternPS000270122145IPR017970Homeobox, conserved site
PROSITE profilePS5084845.676290527IPR002913START domain
SuperFamilySSF559611.74E-34291524No hitNo description
CDDcd088752.09E-124294523No hitNo description
PfamPF018526.4E-57299524IPR002913START domain
SMARTSM002349.7E-52299524IPR002913START domain
SuperFamilySSF559612.75E-25552768No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 775 aa     Download sequence    Send to blast
MPTGAIAPAR LVPQSLATKP MFNSPGLSLA LQTSMEGQGE VARTGANYDS STVGGRRSRD  60
EEHESRSGSE NMDGTASGDD VDVANNLPRK KRYHRHTPQQ IQELETLFKD CPHPDEKQRL  120
ELSRRLCLET RQVKFWFQNR RTQMKTQMER HENSLLRQDN DMLRAENMSM RDAMRNPMCT  180
NCGGPAIIGE ISLGEQHLRI ENARLRDELD RVCTLAGKFL GRPISSLAVS MNPPLRNSSL  240
ELGVGNNGFG GLTGISSTLP LVPSDFGLGI LNHLPVVPPK GPINFTPIDT SLERSMYLEL  300
ALSAMDELVK MAQTDEPLWI RSLEGGTQIL NLEEYFRTFT PCIGMKPNGF ITEASRETGM  360
AIINSLALVE TLMDSNKWTE MFPCIISRTS TTDVVSSGMG GSRDGALQLM HAELQVLSPL  420
VPVREVNFLR FCKQHSEGVW AVVDVSIDAL RETSSGGPTF SRCRRLPSGC VVQDMPNGYS  480
KVTWVEHSEY DESVVHQLYR QLVSAGMGFG AQRWVATLQR QCECLAIVMS SSVPNPDQTA  540
ITPGGRRSML KLAQRMTNNF CAGVCASTLH KWNKLNTGNM DEDVRVMTRK SVDDPGEPPG  600
IVVSAATSVW LPVSPQRLFD FLRDEHLRSE WDILSNGGPM QEMARIAKGQ DHGNCVSLLR  660
ASAMNPKQSS MLILQETCID PSGSLVVYAP VDIPAMQVVM NGGDSAYVAL LPSGFSIVPD  720
GPAAQRVSGS LLTVAFQILV NSLPTAKLTV ESVETVNNLI SCTVQKIKAA LHCES
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV41623.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010661562.10.0PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X2
SwissprotQ0WV120.0ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
TrEMBLA0A2Z7CB040.0A0A2Z7CB04_9LAMI; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
STRINGVIT_15s0048g02000.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16262465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]