PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV41407.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 358aa    MW: 39272.7 Da    PI: 4.204
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV41407.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.4e-19112160254
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                 +y+GVr++k +g+W+AeIrdp     + kr++lg++ taeeA +a+++ r ++e
  KZV41407.1 112 KYRGVRQRK-WGKWAAEIRDPI----KqKRVWLGTYSTAEEASRAYENKRMEFE 160
                 8*******9.**********72....35**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.42E-17112168IPR016177DNA-binding domain
PfamPF008472.5E-12112161IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.8E-23112161IPR001471AP2/ERF domain
SMARTSM003802.9E-19112166IPR001471AP2/ERF domain
PROSITE profilePS5103220.508112169IPR001471AP2/ERF domain
CDDcd000181.93E-23112152No hitNo description
PRINTSPR003671.6E-10113124IPR001471AP2/ERF domain
PRINTSPR003671.6E-10135151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MPEPLKTVSL NQESVFRKLS NKFEPIRSMR KVVIVCDDPD ATDSSDDEGV CKTKVKRFIR  60
EVCFPVEDST QAVKVDESEG SVRDGEYGKK RNPTKKRASP LIERKSSPVA GKYRGVRQRK  120
WGKWAAEIRD PIKQKRVWLG TYSTAEEASR AYENKRMEFE ALAINSDFSM HKNLDDANTE  180
TICSLVDSKN VENQKSNDSS ACVSEHDFGA SSVLPVSHAS PSSVLELESL GSGAGVNLAD  240
EDNAVDVAPV DNNDGGLGDD ELMALAEIGA EMDLDFELNS FMELDNFVPP LDAILGEFDD  300
LPFCGFDDGD HPAALPDVDF DFDFESCNEA LAWIDDVTTP MNGAPPMMNG APLNIACP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-131111741377Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV41407.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070810.11e-138ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2Z7C3W20.0A0A2Z7C3W2_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.24e-26ERF family protein