PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV41073.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 225aa    MW: 24993.1 Da    PI: 6.9645
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV41073.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.96.7e-20104154255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  KZV41073.1 104 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAASAYDRAAFRMRG 154
                 69*******.***********9987..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.10E-32104163No hitNo description
PROSITE profilePS5103224.803104162IPR001471AP2/ERF domain
SMARTSM003802.1E-37104168IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-32104163IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-23104164IPR016177DNA-binding domain
PfamPF008472.2E-14104154IPR001471AP2/ERF domain
PRINTSPR003677.7E-11105116IPR001471AP2/ERF domain
PRINTSPR003677.7E-11128144IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MESPMYQPNL SDQTTPVSFP VFFRSSSFSS LVPCLTETWG DLPLKVDDSE DMVIYGLLRD  60
AVNDGWTPFN NVKVEPEDRS IAAVKTEFPP MMAGPVVGHR TIIHYRGVRR RPWGKFAAEI  120
RDPAKNGARV WLGTYETAEE AASAYDRAAF RMRGSKALLN FPHKIGLNEP DPVRVTAKRR  180
SPETPMSTVS SGSDSGSPKR RKPGLTADHA EPEVESLSNE LQDRS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-34104169570ATERF1
3gcc_A6e-34104169570ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional activator (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV41073.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethylene. {ECO:0000269|PubMed:10945353}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858578.11e-104PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotQ9LW502e-90ERF2_NICSY; Ethylene-responsive transcription factor 2
TrEMBLA0A2Z7C9D81e-165A0A2Z7C9D8_9LAMI; Ethylene-responsive transcription factor 1
STRINGMigut.F00528.1.p1e-104(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40542245
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.11e-46ethylene responsive element binding factor 2