PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV41040.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 778aa    MW: 85770.8 Da    PI: 6.3346
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV41040.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-2096151156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 r+k +++t+ q++eLe++F++n++p++++r eL ++lgL+ rqVk+WFqNrR++ k
  KZV41040.1  96 RKKYHRHTPFQIQELEACFKENPHPDEKSRLELGRRLGLDVRQVKFWFQNRRTQIK 151
                 7999************************************************9987 PP
2START151.57.5e-483025242205
                 HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECT CS
       START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetleviss 87 
                 la++a++el+k+ ++++p W++s     e +n+ e++++f++  +     + +ea r +g v  ++++ +e++ld++ +W+e+++    +a+t++vi s
  KZV41040.1 302 LALAAMNELIKLSQLDSPIWFQSLegggETLNQVEYRKTFSPCTGvsssnFATEATRYTGTVMLDCETIMETFLDVN-RWTEMFPwiigSASTHDVIFS 399
                 6899************************************99877999999**************************.********************* PP

                 T......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS
       START  88 g......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179
                 g      g+l lm ae+q+lsplvp R   f+R+++q++++ w++vdvS+d   ++p+   +v +++lpSg  + ++ ng skvtw+eh++ +++ +h+
  KZV41040.1 400 GsggkrnGVLLLMEAEFQLLSPLVPiRQAKFLRFCKQHKEDIWAVVDVSTDTIFQNPSVNASVSCKRLPSGTTFVDMFNGSSKVTWIEHMEFDESAIHE 498
                 ***************************************************99988887888999********************************** PP

                 HHHHHHHHHHHHHHHHHHHHTXXXXX CS
       START 180 llrslvksglaegaktwvatlqrqce 205
                 ++++l++sg+ +ga++w + l+rqce
  KZV41040.1 499 IYKPLLRSGIGFGAQKWISILKRQCE 524
                 *************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.7E-2182147IPR009057Homeodomain-like
SuperFamilySSF466891.92E-2084153IPR009057Homeodomain-like
PROSITE profilePS5007117.63793153IPR001356Homeobox domain
SMARTSM003893.0E-1995157IPR001356Homeobox domain
CDDcd000864.36E-1996153No hitNo description
PfamPF000464.0E-1896151IPR001356Homeobox domain
PROSITE profilePS5084834.38292528IPR002913START domain
SuperFamilySSF559611.51E-25293524No hitNo description
CDDcd088752.72E-95296524No hitNo description
SMARTSM002349.5E-29301525IPR002913START domain
PfamPF018523.0E-40302524IPR002913START domain
SuperFamilySSF559611.37E-12550769No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 778 aa     Download sequence    Send to blast
MVADGLFNPR PDNNMSYPLQ MVHSSSPQLI FNSSPLSLAL QPKRENTGEM GFIGKGFDNN  60
VMGKTREDEA GSPASDNFEA ASGDDHETLE SKSSKRKKYH RHTPFQIQEL EACFKENPHP  120
DEKSRLELGR RLGLDVRQVK FWFQNRRTQI KTQLERHENS ILKQENDKLR IENITMKEAM  180
RSPMCNNCGS PAILGEVPIE HHHLMIENAR LKDELNRLGV LANKFLGTPA GSMHPVMGNS  240
RLDLGVVRDG LCTLNYSESP LPLGLDFGDR GSSTFPMGPP SGLTMGISSV DVPVNKSVFL  300
DLALAAMNEL IKLSQLDSPI WFQSLEGGGE TLNQVEYRKT FSPCTGVSSS NFATEATRYT  360
GTVMLDCETI METFLDVNRW TEMFPWIIGS ASTHDVIFSG SGGKRNGVLL LMEAEFQLLS  420
PLVPIRQAKF LRFCKQHKED IWAVVDVSTD TIFQNPSVNA SVSCKRLPSG TTFVDMFNGS  480
SKVTWIEHME FDESAIHEIY KPLLRSGIGF GAQKWISILK RQCELVATIT SSTVPTETLT  540
LTGKKSLAKL AQRMTRNFCT GVCSTVHKWE MLQNEISSND TKLAMRQSFG DLGEPSGVIL  600
SATTTVWMPV SPIRLFDFLQ DEKARVHWDV LSQDGPIQQI LYLPKSQDPG NGISILRGNA  660
PPTNRNGVLI FQDTFFDSSG SLIVHAAVDI TGINMVLSGG DSTSLSFLPS GFAILPDCFS  720
DSSKPPGAND CGGSFLTLGF QILVNNLPAA KLTMESIDTV KSLIARTLHG IKTGLDCN
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV41040.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076208.10.0homeobox-leucine zipper protein ANTHOCYANINLESS 2
SwissprotQ9M2E80.0HDG1_ARATH; Homeobox-leucine zipper protein HDG1
TrEMBLA0A2Z7C8P20.0A0A2Z7C8P2_9LAMI; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
STRINGXP_009606532.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16262465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61150.10.0homeodomain GLABROUS 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Horstman A, et al.
    AIL and HDG proteins act antagonistically to control cell proliferation.
    Development, 2015. 142(3): p. 454-64
    [PMID:25564655]