PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV41013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 372aa MW: 41818.7 Da PI: 4.4675 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 117 | 166 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+W+AeIrdp k+ r +lg+++tae Aa +++a+ kl+g KZV41013.1 117 KFRGVRQRP-WGKWAAEIRDPA---KKCRLWLGTYDTAEAAAMVYDNAAIKLRG 166 89*******.**********84...369************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 9.1E-30 | 116 | 174 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.578 | 117 | 174 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.7E-12 | 117 | 166 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.54E-32 | 117 | 173 | No hit | No description |
SuperFamily | SSF54171 | 3.07E-21 | 117 | 174 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 3.7E-38 | 117 | 180 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-9 | 118 | 129 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-9 | 140 | 156 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence Send to blast |
MEQCTLWPVK YTEHRNTAEK IIESSEQQTL SSRKTVRISV TDPDATDSSG DEEEELFQRR 60 RVKKYVTEIR MEASVSIING TNCRKKNAGT GSLLSKPKAK KTKEAPSAVA ASGGVRKFRG 120 VRQRPWGKWA AEIRDPAKKC RLWLGTYDTA EAAAMVYDNA AIKLRGPDAL TNFGTVPAEE 180 SPQINVTSVS GYDSGEELRS LPSPISVLRF RSSNTCQETK PDAANPITSE MKESEPDEFL 240 NGLVNELRLG MEQAYAERDS RWEYPMNMTS PINEPVPDCK VETSAEPDLP FNSLPMEIPS 300 LDELFIFHPK EESLLFQEAQ NFGHYLTESA DDSNLWRFDA ELQDNCIVEF NDSFTEFIEP 360 DDYAFADSLL VL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 3e-20 | 116 | 173 | 1 | 59 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV41013.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076033.1 | 1e-102 | ethylene-responsive transcription factor CRF4-like | ||||
TrEMBL | A0A2Z7C955 | 0.0 | A0A2Z7C955_9LAMI; Uncharacterized protein | ||||
STRING | Migut.F00247.1.p | 7e-85 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA494 | 23 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 3e-56 | cytokinin response factor 4 |