PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV40655.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 543aa    MW: 59855.7 Da    PI: 6.2862
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV40655.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.65.1e-23236292259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +DgynWrKYGqK+vk+ e  rsYYrCt+++C +kk ++++++ ++v+e++Y++ Hnh+
  KZV40655.1 236 SDGYNWRKYGQKQVKSPEGFRSYYRCTFSDCYAKK-IDCCDRTNHVIETVYRSLHNHD 292
                 7********************************98.*********************7 PP
2WRKY96.41.9e-30410466359
                 -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ ++ ++v+itY+g H+h+
  KZV40655.1 410 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIEKAVDNDSAVVITYKGVHDHD 466
                 9*******************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.236230294IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.0E-20232294IPR003657WRKY domain
SuperFamilySSF1182903.79E-19234294IPR003657WRKY domain
SMARTSM007741.5E-20235293IPR003657WRKY domain
PfamPF031067.2E-16237292IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-30395468IPR003657WRKY domain
PROSITE profilePS5081131.823403468IPR003657WRKY domain
SuperFamilySSF1182906.54E-27403468IPR003657WRKY domain
SMARTSM007745.3E-35408467IPR003657WRKY domain
PfamPF031061.8E-23410465IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MEEGAHRSSE ALLAGGNDSS NPLNVEEDEI RGETTGEDDE QRPPSSDNGN DCTVETASSL  60
ETGESKAVEL GTLASVRLSR RGSQNDDSTP NLSEVPVEYS LQTLLSVEEL KVSLSLSSAF  120
LFFDTVLSPS RDLADCSKLS GDQVQAIHKE PLKSNTGQPA QVSIQHLIRP SDAPSKLELS  180
PISVNQSGSS ILSPSSAEQN VVPVENKRNP CVGDQDMDNS PKPKPFATSP VLKASSDGYN  240
WRKYGQKQVK SPEGFRSYYR CTFSDCYAKK IDCCDRTNHV IETVYRSLHN HDPPQKLNCS  300
REIKAARPIM STNGSNDAHH SVRCPTDPVP SVSSKENLLR IDQIPETKQQ QSSGSDDTME  360
INFKDELIDR PECVNRQKRS STAELGPLSK PGKKLKYVVH AAGDMGISGD GYRWRKYGQK  420
MVKGNPHPRN YYRCTSAGCP VRKHIEKAVD NDSAVVITYK GVHDHDMPVP KKRHGSKSVP  480
IVDDTCDSMD NLKNIIMKPY QSQTQLSMDK ESDLTNETMN PGGKKTMETA QTLLNIEFEI  540
KPN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-25398468474WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV40655.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083976.10.0probable WRKY transcription factor 32 isoform X1
SwissprotP595833e-96WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A2Z7C1340.0A0A2Z7C134_9LAMI; Putative WRKY transcription factor 32
STRINGMigut.K00328.1.p1e-144(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91892127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.18e-93WRKY DNA-binding protein 32