PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV38858.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HB-other
Protein Properties Length: 1706aa    MW: 192420 Da    PI: 5.9857
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV38858.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.31.3e-182580257
                T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                 kR   t++qle+Le+ ++ ++yps++ r+eL++klgL++rq ++WF+ rR k++k
  KZV38858.1 25 VKRKMKTPSQLETLEKTYAGESYPSEALRAELSAKLGLSDRQLQMWFCHRRLKDRK 80
                58999*************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.4E-171380IPR009057Homeodomain-like
SuperFamilySSF466892.65E-151780IPR009057Homeodomain-like
PROSITE profilePS5007116.5032181IPR001356Homeobox domain
SMARTSM003891.2E-172385IPR001356Homeobox domain
CDDcd000861.29E-132481No hitNo description
PfamPF000462.2E-162580IPR001356Homeobox domain
PROSITE profilePS5082716.047558617IPR018501DDT domain
SMARTSM005713.0E-19558617IPR018501DDT domain
PfamPF027919.7E-16559614IPR018501DDT domain
PfamPF050664.5E-14688756IPR007759HB1/Asxl, restriction endonuclease HTH domain
PfamPF156125.9E-6908944IPR028942WHIM1 domain
PfamPF156137.9E-910801151IPR028941WHIM2 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1706 aa     Download sequence    Send to blast
MEVGSGSGGG VSDEVEKDRP EEPRVKRKMK TPSQLETLEK TYAGESYPSE ALRAELSAKL  60
GLSDRQLQMW FCHRRLKDRK PTAEKRSGKM ASPSAARANS GGCADELKVV NADVTKEEFS  120
SGLSLFGNMD SFQRQQRVIA HKVGTAVPRI SAELPVMRRF YEPPLAVSEQ RAVAFVEAQL  180
GEPLMEDGPI LGMEFDPLPP GAFGAPIVPS GQQKSAGWPC DLCVNERPET KPIKGSSRTL  240
HEYQFLPEKP HARNDAYERT LPPHYYVSPS DIRTARVPLP TGKSNMHNNE QVCPGYGLQG  300
HMPSFSLLPQ QGRQGIHLSP ASADVDIVPR TVPLMDANID THYVHSKSGL DKQSATPDRV  360
IIYDEMMIER KRKTEEARIA KEVQAHDKRI RKEIEKQNIL RKKREEQMWK EMERKDRERR  420
KEEERMLREK QREEERYQRE QRREMERREK FLQKEYIRAE KMRLKEELRR EKEAVRIKAA  480
NNRAAARRIA KESMDLIEDE RLELMELAAS SNGLPSIMAL DGDTLQNLDS LKDKLPGFPP  540
KSVHLKKPFR VQPWADSEES VGNLIMVWRF LITFADVLGL WPFTLDEFTQ AFHDFDLRLL  600
GEIHVALLRC IVKDIEDVAR TPATSLATNQ HSAVNPGGGH RRIVEGVDGG AEIISNLRSG  660
LAAEHAVALM QERGLSNPRR SRHRLTPGTV KFAAFHILSL VGSKGLSILE VADKIQKSGL  720
RDLTTSKTPE ASISAALSRD TKLFERTAPS TYCVRSPYRK DPVDAESILA AAREKIWVYQ  780
NGIAEGEDAE DVEKENTEQD QDSDSEVAED PDADDLDGEL KLKETSYSSE MSNLKSRTLS  840
HHGKIRPSLS RDTSAVSHGN VKGSSVLTHS FGEIKRNGGS LFDFSGPHSY YISDNNTAVI  900
DEYVSIEPWV QGLTEGEYTD LSIEERLSAL VALTGIANEG NAIRLALEER MEAANALKKQ  960
MWAEAQLDKR RVKDEQVKLQ YSSFAVNRAD QISAHCDIED RIGPQGFDMR NEVSCSKRPL  1020
LLVDLNDQQC EQNSCNDALT QDPLFSDTLL LQRSVYATEK SRKELKAFIA HHAEALYVYR  1080
SLPLGLDRRF NRYWQLITST SPNDPCSGRI FVELIDGVWR LIDSEEDFNA LLSSLDVRGT  1140
REFHLHYMLL KVEASFKVTV RTNLSLATSI KHASDGVQKV LQMRPKLDCY SSMHSSSSFV  1200
FTPYSISPEN ELPLPDESRK NREEEYYIIE SDNGFEKWMM DECLNSRLFA QKYGSLRCRQ  1260
LLDICKYCHE LFSCDDTQCP SCHSTCSTSE KPFDFLKQGK KLSEGFGRVL RKLSFPLQIR  1320
LLKAQLATIE ASIPPDAFKS VWSEENRKSW GMKLHLSSSA AELLETLTLL ENSIERKFLS  1380
ASYEATCELL SSSCHIEHSA DSFSRPGAVA VLAWIPQTTA AVALRLMELD SSIYYTSERK  1440
GVCLEDNGSG HFTKFPSRMG SSMDNVSRAG YLQHHNWLDL ISGQTSLKRS RGRPRGPSRT  1500
SGKSQRKTND CRDHCHVTTG RGEKFGEVTG WRGRPSGCRK GRRSVRNGQK PTKRLTQNTG  1560
AKRLPLDKVS ETPCIRKEER DLEETPFEAV GDESSSSSEE SDFDDLNVQA SPDEYRDVLV  1620
DDLPGVGNVD YGVDVEDDQC VDVGNRDNMD DDDDDDNVED FVPLDYYTDG AFSRQYHDEE  1680
NQSTREEQVG DVDRSRNSSS SSDYSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1413421RKDRERRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV38858.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085379.10.0homeobox-DDT domain protein RLT2-like
TrEMBLA0A2Z7BZ350.0A0A2Z7BZ35_9LAMI; Uncharacterized protein
STRINGXP_009773812.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21422352
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44180.10.0Homeodomain-like transcriptional regulator