PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV38024.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 317aa    MW: 36185.9 Da    PI: 6.766
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV38024.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20112162155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdp+    r +r++lg+++taeeAa  +++a+ k++g
  KZV38024.1 112 KKFRGVRQRP-WGKWAAEIRDPT----RrTRVWLGTYDTAEEAALVYDRAAIKIRG 162
                 59********.**********84....34*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.26E-34112169No hitNo description
Gene3DG3DSA:3.30.730.102.0E-30113170IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-22113169IPR016177DNA-binding domain
SMARTSM003802.3E-37113176IPR001471AP2/ERF domain
PROSITE profilePS5103223.538113170IPR001471AP2/ERF domain
PfamPF008474.0E-14113162IPR001471AP2/ERF domain
PRINTSPR003671.1E-10114125IPR001471AP2/ERF domain
PRINTSPR003671.1E-10136152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MDPKDSKPVK FSVHKTITTV LLPTAPRCKN ACGSKTPRLV RFSVTDCDAT DSSGDECEVE  60
SFRRVRKHVS EVRMEERSRF SKRNTEEKSV VDARGKKKRP PMEQKVVGVE GKKFRGVRQR  120
PWGKWAAEIR DPTRRTRVWL GTYDTAEEAA LVYDRAAIKI RGPDALTNFI KPPDRMAPST  180
VPTEEVLLTS VSGYDSGKEE SCENLCSPTS VLRFRHNNTA PVRSNTAVVR SEFRKIRETL  240
FEPVLQDNKD FLVDDCLPLD QYFMKDYFDF RSPSPLLYDE ITPPEQGIDA AAIDLGVDFE  300
SLTWDVNEYF EDQFLVT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-22110169262ATERF1
3gcc_A2e-22110169262ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV38024.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094793.11e-105pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A2Z7BUG80.0A0A2Z7BUG8_9LAMI; Uncharacterized protein
STRINGMigut.B01832.1.p2e-80(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-54cytokinin response factor 4