PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV37886.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Nin-like
Protein Properties Length: 854aa    MW: 96001.1 Da    PI: 6.8061
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV37886.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.85.2e-29580630252
      RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++
  KZV37886.1 580 EKTISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 630
                 799**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.587569650IPR003035RWP-RK domain
PfamPF020428.8E-25582630IPR003035RWP-RK domain
SuperFamilySSF542776.62E-22746838No hitNo description
SMARTSM006665.7E-27756840IPR000270PB1 domain
PROSITE profilePS5174524.255756840IPR000270PB1 domain
PfamPF005643.8E-18757837IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2401.1E-21757838No hitNo description
CDDcd064071.06E-37758837No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 854 aa     Download sequence    Send to blast
MEEFGFTAVD FSLIDQLLYD GFWLETQTAD GSNFWQPIST HRLTSPSFIF PASDSIGSWD  60
TNPCPDNILK QTQTSDLFLN NPQMDHHDLS DHSNKSSVPP GSLNKPDRVM NTRLLVGTNR  120
TAINARAPVS VRKRLSEAIL RLKDFVRDKN VLIQIWFPVK IDGRQVLITN NQPFSLDSNC  180
KNLAEYRDVS KNYQFPADDK SKEFVGLPGR VFLNKLPEWT PDVRLFKSEE YPRVIHAQLY  240
NVRGSLALPV FEVGSHRCLG VVEIVTTTQK LDYRPELENI CRALQAVDLK SFDVPSPSVE  300
GCDESYQSAL AEIRNIVKYV CSVHDLPLAQ TWAPCTQHNK QGCRHSDENY VHCVSTIDSA  360
CYVADPQVSG FHEACSEHHL LKGEGIPGKA FMSNKPCFSE DVTSFSKTDY PLSHHARVFN  420
MCAAVAIRLR STYTGKADFV LEFFLPLRCK DSNDQKMMLD SLFYVIQQTC QSLRVLSNQE  480
LAQDSSSKET GSANEETWPN FIAPRSEEPS QNAPYWIMNI MDSQHKGKGV SVSFDDDNKE  540
ESGGEFRLTT QWNNHENLSS SGGYLSLDGK TNEKRRTKTE KTISLQVLRQ YFAGSLKDAA  600
KSIGVCPTTL KRICRQHGIT RWPSRKIKKV DHSLKKLQLV MDSVQGAEGP IKLGSFYNNF  660
PEFVSPNLPV NTSHMNAQTA SKSPSSSSGH STSSSYCLST GVKQSSLTLS GDALSVEQII  720
DQGMLKRAMS DAELFHLDPP PMPQNSNMQA KDNTIPYRIK ATFGEEKIRF SLHPHWSFND  780
LKEEVLKRFN VENDLGKVDI KYLDDDAEWV LLTCDADLDE CVDIHRSSKT RTIKITVINK  840
AYNQSLGSSF GSNK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV37886.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551595.10.0LOW QUALITY PROTEIN: protein NLP2
SwissprotQ7X9B90.0NLP2_ARATH; Protein NLP2
TrEMBLA0A2Z7BUC40.0A0A2Z7BUC4_9LAMI; Uncharacterized protein
STRINGMigut.B00011.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20640.20.0Nin-like family protein