PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV37783.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 362aa    MW: 41067.4 Da    PI: 7.6361
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV37783.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.33.2e-28214273159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ ++++ pr+YY+C++a  C+vkkkv+rs edp+++++tYeg+H h+
  KZV37783.1 214 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApICSVKKKVQRSVEDPSLLVVTYEGKHYHH 273
                 58***************************99***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-27209273IPR003657WRKY domain
PROSITE profilePS5081124.558209275IPR003657WRKY domain
SuperFamilySSF1182902.48E-23213274IPR003657WRKY domain
SMARTSM007749.0E-30214274IPR003657WRKY domain
PfamPF031068.3E-23215273IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MLNQIDRVER DLASSSYGLL LNFLPLAFER MEKGHLFNGN CLIDLNSNPM QNPDESLVRT  60
FSQKNRKCML QNSSVTCNLL CVTMISRSSR ETFTSQSCRI NNSEFEDNFT GHARGFSLKD  120
TEELDRLISE NKKLHDMLAT LIKNQNDWVQ KQCNSGEECS RKRKHDDSNF VEKKCCNQAC  180
WEECWSHGTP KGIKPNASKK VLVRVDPSDM SLVVKDGYQW RKYGQKVTRD NPSPRAYYKC  240
SFAPICSVKK KVQRSVEDPS LLVVTYEGKH YHHYHHHSSL QSETAGVSSP GSVSGDPTAS  300
LDLRDPMVHS KMQRAIANCE SKEIQEFFVD QMASSLTRIP GFTAALVSEI SGRILDEEIP  360
EP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-192132721674Probable WRKY transcription factor 4
2lex_A3e-192132721674Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV37783.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081961.12e-76probable WRKY transcription factor 40
TrEMBLA0A2Z7BT930.0A0A2Z7BT93_9LAMI; WRKY transcription factor
STRINGMigut.E01464.1.p3e-61(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45002242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25000.11e-45WRKY DNA-binding protein 60