PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV37444.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24603 Da PI: 10.0177 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.7 | 3.9e-20 | 131 | 180 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp+ + +r++lg+f t eeAa+a+++a+ +++g KZV37444.1 131 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFQTSEEAARAYDKAAIEFRG 180 59*******.**********94....36************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 8.0E-39 | 131 | 194 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.0E-32 | 131 | 188 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.6E-14 | 131 | 180 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.11E-22 | 131 | 189 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 25.264 | 131 | 188 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.76E-33 | 131 | 188 | No hit | No description |
PRINTS | PR00367 | 5.6E-12 | 132 | 143 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.6E-12 | 154 | 170 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MRQISRKSIQ QEKSVEIISQ MSYSLHVLEQ LRPPPPRMTA EEEAAVMVAA LRNVITGGDR 60 SAANPVQDFK IPSRFDQVSG FVAVPEYMET CRFCGINGCL GCHFFDGDEK KKKVGIKNIG 120 AGKKKVGAKK NYRGVRQRPW GKWAAEIRDP RKAARVWLGT FQTSEEAARA YDKAAIEFRG 180 PRAKLNFPFA DYTSTSASTS SAAPPAAVQE YVHCGVTENR SD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 1e-23 | 130 | 189 | 1 | 61 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
2gcc_A | 1e-23 | 130 | 189 | 4 | 64 | ATERF1 |
3gcc_A | 1e-23 | 130 | 189 | 4 | 64 | ATERF1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV37444.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011088263.1 | 7e-65 | ethylene-responsive transcription factor ERF109 | ||||
Swissprot | Q9SZ06 | 3e-35 | EF109_ARATH; Ethylene-responsive transcription factor ERF109 | ||||
TrEMBL | A0A2Z7BST2 | 1e-165 | A0A2Z7BST2_9LAMI; Uncharacterized protein | ||||
STRING | Migut.B00347.1.p | 1e-54 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33710.1 | 7e-31 | ERF family protein |
Publications ? help Back to Top | |||
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