PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV36194.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 23824.7 Da PI: 8.216 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.3 | 2.6e-20 | 28 | 77 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++GVr ++ +gr++AeIrd ++ ++r++lg+f++aeeAa+a++aa+++l+g+ KZV36194.1 28 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEEAARAYDAAARSLRGA 77 89******.**********883....5*************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 22.721 | 27 | 84 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 7.1E-32 | 27 | 90 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-10 | 28 | 39 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.8E-13 | 28 | 76 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.7E-21 | 28 | 84 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.8E-30 | 28 | 84 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.21E-18 | 28 | 84 | No hit | No description |
PRINTS | PR00367 | 1.4E-10 | 50 | 66 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MSRGRAAERL PVCGGEANGS GGPKEITFRG VRKRPWGRFA AEIRDPWKKT RVWLGTFDSA 60 EEAARAYDAA ARSLRGANAK TNFAFPDFGP NLLRIHNSPN DLFVDSPFYP QDPRPFTPLR 120 PTSSCTSSTV ESCSGPRQLP PPHTRLGQKR RHQLLPPAVP NDCHSDCGSS SSVVDNTECD 180 ISSSFCKKPR PFDLNMPPPE DTASAELDEL ACTDLRL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-19 | 22 | 83 | 9 | 71 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00194 | DAP | Transfer from AT1G50640 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV36194.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011095450.1 | 2e-70 | ethylene-responsive transcription factor 3-like | ||||
Swissprot | Q9SXS8 | 7e-50 | ERF3_TOBAC; Ethylene-responsive transcription factor 3 | ||||
TrEMBL | A0A2Z7BPA7 | 1e-157 | A0A2Z7BPA7_9LAMI; Ethylene responsive factor | ||||
STRING | Migut.M01719.1.p | 6e-68 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3330 | 23 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 6e-24 | ethylene responsive element binding factor 3 |