PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV34837.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

bZIP

Protein Properties

Length: 407aa MW: 45035.1 Da PI: 6.4091

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV34837.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.7	1.4e-09	230	287	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK+ +i eLe+k+++L++e ++L +l l+ l +e KZV34837.1 230 KRAKRIWANRQSAARSKERKLRYIGELEKKIQTLQTEATSLSGQLTLLQRDTNGLSAE 287 9*****************************************9999998777666655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.3E-13	226	290	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.404	228	291	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.85E-11	230	281	No hit	No description
Gene3D	G3DSA:1.20.5.170	7.6E-11	230	284	No hit	No description
Pfam	PF00170	3.4E-8	230	284	IPR004827	Basic-leucine zipper domain
CDD	cd14703	1.05E-23	231	280	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence Send to blast
MDKDKSHHSC ENLPPPSGRY SAFSSSVSVY NLKTEVSGSS NVPPFGPDYS PETGHFGRES 60 LPDSSRFRHD MSRMPDNPPK KLGHRRAHSE IVTIPDDISF DSDLGVVGGF DGPSFSDDTE 120 EDLLSMYLDM DKFNSHSVNS EFQVGEASLA TESHVRLALA SAYGSMSADI VATGLNDKPR 180 IRHQHSQSMD GSANVKSEML MCGLEDITPA ESKKAMSAAN LAELALVDPK RAKRIWANRQ 240 SAARSKERKL RYIGELEKKI QTLQTEATSL SGQLTLLQRD TNGLSAENSE LKLRLQTTEQ 300 QVHLQDALND ALKEEIQHLK VLTGQTILNG GAKMNFPSSY GTNQQYHSTN HVAQTLLTAQ 360 QLQQLQLQKT QKQPHLTQQV QPSMQQEQQQ PRNFAPCSVH QDLTPDA

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence Send to blast

MDKDKSHHSC ENLPPPSGRY SAFSSSVSVY NLKTEVSGSS NVPPFGPDYS PETGHFGRES  60
LPDSSRFRHD MSRMPDNPPK KLGHRRAHSE IVTIPDDISF DSDLGVVGGF DGPSFSDDTE  120
EDLLSMYLDM DKFNSHSVNS EFQVGEASLA TESHVRLALA SAYGSMSADI VATGLNDKPR  180
IRHQHSQSMD GSANVKSEML MCGLEDITPA ESKKAMSAAN LAELALVDPK RAKRIWANRQ  240
SAARSKERKL RYIGELEKKI QTLQTEATSL SGQLTLLQRD TNGLSAENSE LKLRLQTTEQ  300
QVHLQDALND ALKEEIQHLK VLTGQTILNG GAKMNFPSSY GTNQQYHSTN HVAQTLLTAQ  360
QLQQLQLQKT QKQPHLTQQV QPSMQQEQQQ PRNFAPCSVH QDLTPDA

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor with an activatory role.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00126	DAP	Transfer from AT1G06070	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV34837.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011091638.1	0.0	probable transcription factor PosF21
Refseq	XP_011091639.1	0.0	probable transcription factor PosF21
Swissprot	Q04088	1e-137	POF21_ARATH; Probable transcription factor PosF21
TrEMBL	A0A2G9GFX2	0.0	A0A2G9GFX2_9LAMI; Uncharacterized protein
STRING	XP_008222595.1	1e-176	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3965	21	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-143	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Xu C, et al. Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration. Nat Plants, 2018. 4(2): p. 108-115 [PMID:29358751]