PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV34223.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 372aa    MW: 41892.3 Da    PI: 5.4483
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV34223.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.61.6e-123011823128
         NAM  23 vegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdW 121
                  +g +l+  +v++++  ++++P++Lp      e  wy    ++kk             g+Wk +g+  +++s +++  g + +L +++g+ap+g++tdW
  KZV34223.1  30 NRGFSLPS-NVLADMSPFQYHPSNLP------EGIWYLVDANEKK---------DSVYGFWKDKGEACKIYS-NSSISGWRVSLEYFEGQAPHGQRTDW 111
                 55555555.66777888888888887......1234444433333.........3457**************.9999********************** PP

         NAM 122 vmheyrl 128
                 +mh+ ++
  KZV34223.1 112 LMHQHKI 118
                 ***9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.9848141IPR003441NAC domain
SuperFamilySSF1019411.02E-1623139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MCPPAEPSSP AEIGQLLNDE QSFLWLDRYN RGFSLPSNVL ADMSPFQYHP SNLPEGIWYL  60
VDANEKKDSV YGFWKDKGEA CKIYSNSSIS GWRVSLEYFE GQAPHGQRTD WLMHQHKITL  120
KELFYKDKPK ELRSLCKVFL FKESESIPDN ESHRSQNSKS VVGSKPIIEV ASVIPDINST  180
HVQDSENESN AKMKCDAGLL PLTDVTLDFS PEDFSQLECF SRGDYLELDD LRDDPESNFS  240
SSQNSSCPSK LSDEYFDSLA LLQDLEKEDN TPRHHFTHSV RSDHAIIQPP SSGSGLSLAS  300
LNERLRVERA PESTAKRHIS DSRNEGPSDL SYSSSSPSAS HTNASSDGEK KTSRSQSGRM  360
KKLKRYFCFK PS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV34223.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074497.11e-106NAC transcription factor 29-like isoform X3
TrEMBLA0A2Z7BIF30.0A0A2Z7BIF3_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112072123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.15e-13NAC domain containing protein 28