PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV33312.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 381aa MW: 43086.6 Da PI: 4.6525 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.1 | 5.1e-19 | 46 | 95 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g KZV33312.1 46 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 95 789******.7*********33....35**********************99998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 4.62E-32 | 45 | 102 | No hit | No description |
SuperFamily | SSF54171 | 3.14E-19 | 46 | 103 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.6E-27 | 46 | 102 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 9.2E-14 | 46 | 95 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.7E-36 | 46 | 109 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.559 | 46 | 103 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.3E-8 | 47 | 58 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.3E-8 | 69 | 85 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence Send to blast |
MARKRKACEG QEKSNHGEVN VATWDDMVQE AGSLAMVGGV RRARKRFVGV RQRPSGRWVA 60 EIKDTIQKIR VWLGTFDTAE EAARAYDEAA CLLRGANTRT NFWPRSPNSS STPALSSKIT 120 NLLLSRLKAR STNALNPGCN SNSSSSSSSS SMAFADHQKQ ISEYTYEAGH DILESHFTDF 180 LNDSDEDYAL EHSNMITTDY HNCLSFESNM TQTESNHHRV SEHESNYFLQ ELEMGNEIQD 240 EIIATLEPVD FKFVDEIGSI GYSPFEITEE IARPMDHEDE PLILTEAMRR MNYERKFSAS 300 LYTFNGIREC LKLKMKHSLD SSDQLSRLRN ACELSQEDSK NSTVEQEKMD DGDEISGDLS 360 NQDGELLLWN SIELAPICFV N |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 9e-14 | 39 | 111 | 7 | 79 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV33312.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011098777.1 | 1e-139 | ethylene-responsive transcription factor 10-like | ||||
TrEMBL | A0A2Z7BG35 | 0.0 | A0A2Z7BG35_9LAMI; Dehydration-responsive element-binding protein 2E-like | ||||
STRING | cassava4.1_008867m | 1e-109 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4310 | 20 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 4e-22 | related to AP2 11 |