PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV32853.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family C2H2
Protein Properties Length: 337aa    MW: 37762.9 Da    PI: 7.5399
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV32853.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.00015426123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C + F++ s L  H+r+H
  KZV32853.1  4 HRCKVCFRNFTNGSALGGHMRSH 26
                79********************9 PP
2zf-C2H213.20.00027201223123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+ C+k F++   L  H+ +H
  KZV32853.1 201 YRCETCNKLFRSYQALGGHMASH 223
                 9*******************999 PP
3zf-C2H211.70.0008256278123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++Cp C ++Fs+   L  H r+H
  KZV32853.1 256 HECPFCERVFSSGQALGGHKRSH 278
                 79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.7E-6328IPR007087Zinc finger, C2H2
SuperFamilySSF576676.86E-5329No hitNo description
SMARTSM003550.2426IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.723426IPR007087Zinc finger, C2H2
PROSITE patternPS000280626IPR007087Zinc finger, C2H2
PROSITE profilePS501579.91201228IPR007087Zinc finger, C2H2
SuperFamilySSF576671.41E-9201223No hitNo description
SMARTSM003550.0089201223IPR015880Zinc finger, C2H2-like
PfamPF139126.3E-11201225IPR007087Zinc finger, C2H2
PROSITE patternPS000280203223IPR007087Zinc finger, C2H2
SuperFamilySSF576671.41E-9251278No hitNo description
Gene3DG3DSA:3.30.160.600.001252278IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.0E-10255278IPR007087Zinc finger, C2H2
SMARTSM003550.035256278IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.536256278IPR007087Zinc finger, C2H2
PROSITE patternPS000280258278IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MDRHRCKVCF RNFTNGSALG GHMRSHMKNF YVSEQEKEHN PEKIDDLQSL ESYSSISSQY  60
LSSQKDDGID DEKQLQVDPE FSSVLVQDRE SDTDSSKDHS ICRRSKRVRD SIRTSEFASF  120
RARSLSGFKK SKFGDHEAKT KCAAITPVED VAYCLMMLSR DRWEKDENKI NLRGERYRFG  180
DDFCGDSDAS KVGKNKVRGK YRCETCNKLF RSYQALGGHM ASHKKMTSSP SNHESSSEMA  240
DSGGGSAAGV EEEKVHECPF CERVFSSGQA LGGHKRSHFV RGGGISRTNM VRPVVSTPDE  300
SISRNGKHLK LDLNLPAPVQ GDEDEMSQIA VSSVFDP
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV32853.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090203.12e-87zinc finger protein ZAT4
TrEMBLA0A2Z7BEF00.0A0A2Z7BEF0_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10952480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.14e-49C2H2-like zinc finger protein