PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV32636.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ARR-B
Protein Properties Length: 631aa    MW: 70317.3 Da    PI: 6.0386
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV32636.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like80.71.7e-25194247155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kp+l Wt+ LH++F++a++++ G ++A+Pk+ile+m+v+gLt+e+v+SHLQkYRl
  KZV32636.1 194 KPKLIWTNSLHNQFLQAIRRI-GLDRAVPKKILEVMNVPGLTRENVASHLQKYRL 247
                 79*******************.********************************7 PP
2Response_reg709.9e-2471151109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   +l+vdD+ + ++ ++++l+k +y ev  a+++++a+ +l+ k+  +Dl++ D+ mp+mdG+el+k i++e  +lp+i+++a  ++++  ++++ G+ 
    KZV32636.1   7 ILLVDDDLICLSHVANMLKKFNY-EVVMARHPQDAIYTLRLKKgaFDLVVSDVHMPDMDGFELTKAIAQEF-DLPVILMSADIQDSTFSKVVENGVA 101
                   89*********************.9999*********99666566**********************9999.9************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                    fl Kp++  +l++
    KZV32636.1 102 FFLPKPVSAHNLRD 115
                   *******9999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.57E-314134IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.2E-324137No hitNo description
SMARTSM004481.1E-235117IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011034.2896121IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.8E-217115IPR001789Signal transduction response regulator, receiver domain
CDDcd001568.56E-258120No hitNo description
PROSITE profilePS512949.501191250IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.7E-26192251IPR009057Homeodomain-like
SuperFamilySSF466892.78E-19192251IPR009057Homeodomain-like
TIGRFAMsTIGR015579.3E-25194248IPR006447Myb domain, plants
PfamPF002498.9E-6199246IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    Send to blast
MAHSISILLV DDDLICLSHV ANMLKKFNYE VVMARHPQDA IYTLRLKKGA FDLVVSDVHM  60
PDMDGFELTK AIAQEFDLPV ILMSADIQDS TFSKVVENGV AFFLPKPVSA HNLRDIWRFA  120
STRRRRQTTT VEEIRRLPEP ETSSEKTNLV EIIAMSASSD DKVNDVEKDL NEKELGKRVC  180
NENSEVSASS SPKKPKLIWT NSLHNQFLQA IRRIGLDRAV PKKILEVMNV PGLTRENVAS  240
HLQKYRLFLR RVSDANFKTP SGSEEKFTSS TITPSGSNSW TSIFDNRQHP CRFPNSSISA  300
SSSSILTGST YARILANEGD FCKPYVACSN FPIRNTDCSN LPKYGLSACL TAPSSGGNIG  360
TSSNVASMQP ITHQTNYVGY SISNLQRLAV SGMFKINQDG VQSDNALMDV PNAAIHRNNL  420
SLEANSLDEH SSFDDILDQL FADSSSTESA PNNNDEIQLS NVIAEYQKLI NKSNISVQNG  480
MENGELCSNG LFDLEELDTV MPTQQPLDGV QSYHTTLPVP ASFENHQEQR AGTNTDLGYD  540
PLEFNASASQ LNNISLSPIQ VCSMFFTISS FITFFCFDLG LIHDSKMASL TFIFQYKISY  600
RLKMTNFWSR YSSISPGRIK TLMVSKFFTY I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A7e-22190253164ARR10-B
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV32636.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7BL380.0A0A2Z7BL38_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32902038
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.11e-53response regulator 1