PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV32195.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 917aa    MW: 102754 Da    PI: 7.3057
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV32195.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.61.3e-329917552129
         NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                 ++e+++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle
  KZV32195.1  99 TEEQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYS-KQDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 175
                 34567**************************************.899*****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100530.12935197IPR003441NAC domain
PfamPF023659.7E-1693174IPR003441NAC domain
SuperFamilySSF1019413.66E-3299180IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 917 aa     Download sequence    Send to blast
MGCHKETLVY LISKSKEGVE NSPFAGELGA VLLIGVISSE FIDVALELVL NHPHMTTLKD  60
KDNNHALHIL AGTKFVFPSG ESFSWLQKFI YKQLCRIGTE EQNDWYFFSH KDKKYPTGTR  120
TNRATAAGFW KATGRDKAIY SKQDLIGMRK TLVFYKGRAP NGQKSDWIMH EYRLETDENG  180
TPQARSMDDT TFHIWPTRSP KIRENISPED HAEISAEIRS SQPPSPSINT STSRLDILGN  240
LLSRPARENL IYICCGIYYL DLLGKILSLF TEDLLSRPAW EYIISICCGI YYRGLLGNIL  300
SLFDVESLIC ACSGISYLYV LCNLLSRPAR KYVISICCGI YYLDMLGNIL SLFAREPIIS  360
TTEIIHKPDQ LGTQSPVPHW PLSPTSSATK PNSTLVIKPD QLDTQRPVSH WPLSPTSSAT  420
KPNSTLVIKP DQLDTQRPVS HWPLSPTSSA TKPNSTLVIK PDQLDTQRPV SHWPLSPTSS  480
ATKPNSTLVI KPDQLDTQRP VSHWPLSPTS SATKPNSTLV IKPDQLDTQR PVSHWPLSPT  540
SSATKPNSTL VIKPDQLDTQ RPVSHWPLSP TSSAPKPSSA LATIGQILLT TSPTTLEQDL  600
TARLHLSLQG LHLGLEGWDF TSGPDLSYIY SYTSILRLGL TAGILLMPPI NHVGTRGPSS  660
ALQAKPGTPA RETPEDHVPT TEEEPALDTP FLVQMNLGWI RLSLFEGSMD DTTFHIWPTR  720
SPNIRENISP EDHAEISAEI RSSQPPSPSI NTRRQEDVFS IAGDSLEISL VLHKPRKKMY  780
PLKIRKFLQI FNILNLVLPN HIYLKFNLIP FVPMYPRAPY PMPPLNYWQN TYNPYLTPST  840
YYGYHNPQPN DSPMEKEPAT PTSVPETQLS ERETPIDLEH LDKVDIGGEG KKKRSNWSKA  900
EDELIIHERL CEDIGKR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-2310417470140Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV32195.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7BDN60.0A0A2Z7BDN6_9LAMI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.15e-44NAC 007