PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV31776.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 313aa    MW: 34577.4 Da    PI: 6.1639
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV31776.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-19124173255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  KZV31776.1 124 KFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDHAAIQLRG 173
                 89*******.**********72....45*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.6E-30123181IPR001471AP2/ERF domain
CDDcd000185.64E-31124180No hitNo description
SMARTSM003801.2E-36124187IPR001471AP2/ERF domain
PfamPF008474.4E-12124173IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-21124182IPR016177DNA-binding domain
PROSITE profilePS5103223.63124181IPR001471AP2/ERF domain
PRINTSPR003673.2E-10125136IPR001471AP2/ERF domain
PRINTSPR003673.2E-10147163IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MLYGGIKYSE HVTQTTAVRP PEYSNTGGGN FPTTVRFFVT DAEATDSSSD EEEGCTVKRQ  60
RVRKFVDEVR FQPCFGNNGS KNGNVKADKV LKRKRSEAAA PLKQKKRGGR RNENPAAKLG  120
SGRKFRGVRQ RPWGKWAAEI RDPLRRVRLW LGTYDTAEEA AMVYDHAAIQ LRGPDALTNF  180
STPTVLDNKK SSGYNSGDES HNTASALSPK SVLRFDSKPE AQPPSTNCPV SIDEDSQIFP  240
PKVDLFSGFE NPVPDLFDQT GLLGDIFGAD FDSCGQMLIG STHDFALDFG LWQTDDYFQD  300
FGDIFGSDPL VAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-19122180362ATERF1
3gcc_A2e-19122180362ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18794DKVLKRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV31776.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080873.11e-118ethylene-responsive transcription factor CRF2
TrEMBLA0A2Z7BIK80.0A0A2Z7BIK8_9LAMI; Uncharacterized protein
STRINGMigut.E01228.1.p1e-102(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.28e-50cytokinin response factor 2